Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DhcVS_312 |
Symbol | proS |
ID | 8657255 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides sp. VS |
Kingdom | Bacteria |
Replicon accession | NC_013552 |
Strand | - |
Start bp | 304332 |
End bp | 306041 |
Gene Length | 1710 bp |
Protein Length | 569 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | |
Product | prolyl-tRNA synthetase |
Protein accession | YP_003329799 |
Protein GI | 270307741 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGTTATT CCAGGTTATT TGGCAAGACC CAGCGTGAAA TCCCGTCAGA TGCCGAAACT ATAAGCCACC AGCTGCTGCT GCGTTCAGGC ATGATAGCCC AGCTAACCGC CGGAGTATAT TCGTTTATGC CTCTGGCCTG GCGGTCTATC CAGAAAATTG AAAACATTAT CCGTCAGGAA ATGAATAAAT CAGGCTGCCA GGAACTGGCC ATGCCGGTAC TCCAGCCGGT GGAAATATGG CAGCAAAGCG GACGCGAAGC CCCCTTCGGG CAGACCCTTT TCCATTTGAA AGACCGCAAA GACCGTAATC TGGTGCTTGG CCCTACCCAC GAGGAGGTTA TAACCGACCT TGCCAGCCGC TATATCCAGA GTTACCGTGA CCTGCCCCAG CGGCTTTACC AGATACAGAC CAAATTCCGT GATGAGCCAC GCCCCCGCGG CGGATTGATA CGGGTACGCG AATTTATTAT GAAAGATATG TATAGTTTTG ATGCCAGCCC CGAAGGGTTG GACGAAAGCT ACCAGACCAT GAAACAGGCC TATGAAAGCG TATACCGCCG CTGTGGTCTG GAATCTATGG TAATAGATGC AGACAGCGGA GCTATAGGCG GAAAGGCCTC ACACGAATTT ATGATTGTGG CCGAAAGCGG CGAAGACAGT ATCATCTACT GCCCGAAGTG CAATTATGCC GCCAATGCCG AAAAAGCAGT GTTCAAAAAG AAAACCCTGC CCAAAGAACC CTTAAAAGAC TTGGAGGAAA TAGCCACCCC CGGCCAGAAG ACTATTTCAG AGGTAGCCGC TTTTCTTTCA CTCAAACCGG AAAATACCCT CAAAGCAGTC TTTTACATGG CAGACGGAAA GTTTGTGATG ACGGTCATAC GGGGAGACCT GGATATAAAC GAAATAAAGC TGAAAAATCT GCTGAAGTGC AATGACCTGC GTCTTGCGGA AGACAGCGAA GTAAAAGCCG CCGGAATAGC AGCCGGATTT GCATCACCCG TGGGGCTGAA AAATATCCTG ATAGTGGCTG ATGACTCCGT TGAAAACGGC TCTAACTTTG TAGCCGGGGC TAACAAAGAC GGCTTTCACT TGAAACACGT CAACTCCGGG CGGGATTTCA AGGCAGATAA AATGGCGGAT ATTGCCCTGG CGGCCGAAGG TGCTGCCTGC CCCTTCTGTG ACGGCACTTT TGCCTCCAAA CGGGGGGTTG AAGTGGGGCA TATTTTTAAA CTGGGAACAT TCCTTTCAGA ACGTTTCGGG GCAAACTTCA CAGATGCCGA GGGCATCAGC CACCCGATAA TAATGGGGTG CTACGGCATG GGGGTAGGAC GGCTGCTGGC CGCCGCCATA GAGCAAAACC ATGACGAAAA AGGCATTATC TGGCCTATGC CTATTGCTCC GTATCAGGTA TATATCTGCG GGCTTTTCCT GGATAAACCG GCAGTCAGCC AGGCGGCTGA AAAGATGTAT GCCGAACTGG AAGCCCAAGG TGTGGAAGTG CTTTTTGACG ACCGCGAACT TACAGCCGGG GTCAAATTTA ACGATGCAGA CCTCTTAGGT ATCCCCCTGA GGCTGACGAT AAGCCCCCGC AATCTGGATA AAGGCGGGGT GGAACTCAAG CTCCGCCGGA ACAAAGAAGC CGAGTTGGTT CCACTGGATA ATATAGTGGA AAAGGTAATT GCCACCATCA AATCCGAGAG CAACCTGTAG
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Protein sequence | MRYSRLFGKT QREIPSDAET ISHQLLLRSG MIAQLTAGVY SFMPLAWRSI QKIENIIRQE MNKSGCQELA MPVLQPVEIW QQSGREAPFG QTLFHLKDRK DRNLVLGPTH EEVITDLASR YIQSYRDLPQ RLYQIQTKFR DEPRPRGGLI RVREFIMKDM YSFDASPEGL DESYQTMKQA YESVYRRCGL ESMVIDADSG AIGGKASHEF MIVAESGEDS IIYCPKCNYA ANAEKAVFKK KTLPKEPLKD LEEIATPGQK TISEVAAFLS LKPENTLKAV FYMADGKFVM TVIRGDLDIN EIKLKNLLKC NDLRLAEDSE VKAAGIAAGF ASPVGLKNIL IVADDSVENG SNFVAGANKD GFHLKHVNSG RDFKADKMAD IALAAEGAAC PFCDGTFASK RGVEVGHIFK LGTFLSERFG ANFTDAEGIS HPIIMGCYGM GVGRLLAAAI EQNHDEKGII WPMPIAPYQV YICGLFLDKP AVSQAAEKMY AELEAQGVEV LFDDRELTAG VKFNDADLLG IPLRLTISPR NLDKGGVELK LRRNKEAELV PLDNIVEKVI ATIKSESNL
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