Gene DhcVS_258 details

Gene Information

• Locus tag: DhcVS_258
• Symbol: lonC
• ID: 8657202
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dehalococcoides sp. VS
• Kingdom: Bacteria
• Replicon accession: NC_013552
• Strand: -
• Start bp: 244217
• End bp: 246247
• Gene Length: 2031 bp
• Protein Length: 676 aa
• Translation table: 11
• GC content: 49%
• Product: ATP-dependent Lon protease
• Protein accession: YP_003329748
• Protein GI: 270307690

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAACAGG ATGACTTAGA TAAAAAAGTA ACGAGCATAT TCGCCGGAAA AGTAGTTAGG 
AAAGATCTCC TCCACCAAAT CAAGGGCGGC GAGAACGTAC CATCGTACGT GCTTGAATAT 
CTTCTTGGGA AGTATTGTGC CTCAGATAAC GATGAGGAAA TACGCATTGG AGTGGACGCG 
GTCAAAGAAA CTTTAACAAC GAACTACTTC CGCCATGACG AGGCGAATAA GGCACAATCA 
ATGGTCGAAC AGAAGGGCAA GCATCGGTTC ATTGACCGGA TCGAAGTACG CTTTCTACCA 
AGTGAAAATA AGTATTGGGC GTCAATGGAC CACTTCGGAT ATGCCAGGAT TCACATTCCT 
GAAGAGTTCT ACCGCCGCTA CGAACGGCTT CTCGAGGGGG GCATTTGGGC TATTGTAGAC 
GTTGAATTCA GACTATCTGA GGAGGGAAAG AAAGACAGTC CCTTTCATGT CGTCGACCTC 
AAGCCCATTC AGCTCGCTCG TTTTGACTTG GATGAGTACT TGGATGGAAG ACGCGACTTG 
AGTAGAGATG AGTGGATTGA CCTTCTCCTT CGTAGTATCG GCTTAGAACC AGTAAGGATG 
GATAGGCGGT TGAAAATCCT GCTTATCACC CGATTAATCC CGTTTGTCGA GAAGAATTAC 
AATTTTATCG AGCTGGGACC GCGGGGAACT GGTAAGTCTT ATGCGTTCAG CGAGATGTCC 
CCGTATTGCA TGTTGCTCTC TGGCGGCAAG GCTAGCACTG CAAACCTTTT TTACAACAAT 
GCACGCCGGC AAGTTGGGCT TGTAGGTCAT TGGGATGTCG TTGCCTTCGA TGAAGTCGGA 
GGGATGAAGA TCACAGACCC AGATGCAATC CAAATTATGA AAGACTATAT GGCTAACGGC 
CGGTTCAGCC GTGGGGTTAC ACAAGTGCTG GCAGACGCAT CTTTGGTATT CATCGGAAAC 
TTGAACAATC CTGTAGAAAG CCTAGTTCAA AATTCGGCCA CAGATCTTTT CCAGCCATTG 
CCAAAGGAGT TTGATCTCGC CGTCCTTGAT CGTATTCATT TTTACCTTCC AGGTTGGGAA 
GTGCCCAAGA ACTCGAAGGA TATGTTAACG GTTCACTATG GATTCGTAAC CGACTATCTG 
GCTGAGGCTT TCCGTGCGCT ACGAAAGCAA AACCGTTTCG ATGAAACAGA ACGTGTCTTC 
CGATTCGGTT CGCATGTCGA AGGCCGAGAC GCTACGGCTG CCAAGAAAAC CGTGAGCGGT 
TTGCTCAAAA TCCTACATCC CGGCGGGGAA TGGACAAAAG AGGAACTTAC AGAATATCTA 
GAGTTGGCAA TGGAAGGGCG TAGACGTGTG AAGGAGCAGC TTAAGAAACG CGGGTCATTT 
GAGTTCTATA AAACAAGTTT CTCATACATT AATCTTGAAA ACGATGCAGA ACGATCCGTG 
GGTGTACCTG AGCAAGGCGG AGCTGGAGTG ATCTCGCCGG ATCCTTTGCC AGCAGGGACA 
GTCTACACTG CCTCGGTGGA CTCCGAAGCT AAGGTCGGAT TATTTCGGAT TGAAATCACG 
TTGACGGCGG GCACGGGCAA GCTCAGGACT CCGACCGGAC TCGAAAAGTC GCTCAAAGAA 
TCATTGAATC GAGCCTTCAG TTACCTGCAG AACGTCAAAG ATAAGCTCGG ACTCACACAG 
ATGCTGGCAC AAAAGGACAT CTATGCTGAA GCCGTGGATC TCTCTGGAGG ACGAATCGAT 
TGTCCTTGCG GCGTAGCGTT TTTCTCCGCC ATTATTTCGG CCGTCCGCGG CCGCCAAGTG 
CAGGCTGGAA CGGTCGTTGT TGGTGACCTG ACTATTCAAG GCAATATCAA AGGACCTGCC 
TCTATCACAG AACCGTTGCA ATTATGTCTG GAAGCTGGAG CCGCTCGCGT GTTGGTTCCT 
GTTTCAAACA AGGCACAGTT CGCTGGATTA CCGGAAGATG TGATTGAACG CTTGGACGTC 
GTGTTCTATG GGGACATAGA TCGAGCGGTG TTGAAGACGC TGGAGACATG A 

 

Protein sequence

MQQDDLDKKV TSIFAGKVVR KDLLHQIKGG ENVPSYVLEY LLGKYCASDN DEEIRIGVDA 
VKETLTTNYF RHDEANKAQS MVEQKGKHRF IDRIEVRFLP SENKYWASMD HFGYARIHIP 
EEFYRRYERL LEGGIWAIVD VEFRLSEEGK KDSPFHVVDL KPIQLARFDL DEYLDGRRDL 
SRDEWIDLLL RSIGLEPVRM DRRLKILLIT RLIPFVEKNY NFIELGPRGT GKSYAFSEMS 
PYCMLLSGGK ASTANLFYNN ARRQVGLVGH WDVVAFDEVG GMKITDPDAI QIMKDYMANG 
RFSRGVTQVL ADASLVFIGN LNNPVESLVQ NSATDLFQPL PKEFDLAVLD RIHFYLPGWE 
VPKNSKDMLT VHYGFVTDYL AEAFRALRKQ NRFDETERVF RFGSHVEGRD ATAAKKTVSG 
LLKILHPGGE WTKEELTEYL ELAMEGRRRV KEQLKKRGSF EFYKTSFSYI NLENDAERSV 
GVPEQGGAGV ISPDPLPAGT VYTASVDSEA KVGLFRIEIT LTAGTGKLRT PTGLEKSLKE 
SLNRAFSYLQ NVKDKLGLTQ MLAQKDIYAE AVDLSGGRID CPCGVAFFSA IISAVRGRQV 
QAGTVVVGDL TIQGNIKGPA SITEPLQLCL EAGAARVLVP VSNKAQFAGL PEDVIERLDV 
VFYGDIDRAV LKTLET