Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DhcVS_196 |
Symbol | |
ID | 8657149 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides sp. VS |
Kingdom | Bacteria |
Replicon accession | NC_013552 |
Strand | + |
Start bp | 194024 |
End bp | 194518 |
Gene Length | 495 bp |
Protein Length | 164 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | |
Product | PBS lyase heat-like repeat domain protein |
Protein accession | YP_003329695 |
Protein GI | 270307637 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.69738 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAGATA CCAAGTTTAT TGCGCAGCAG CTAGAGCTTT TAAAAGACCC GAATGGGCTG GTACGCCAGT CCGCCCGTCT GGCACTCGAA GATTTGGGTA AAGCAAGCGT GCCGTATCTG GTAGCAAAGC TGGATGAGAA TAAGGGTGAT GCTCTGTGGG AAAATGTTAA GGCCCTTAGC CGCATCGGGG ATGCCTCTTC TGCCGGGGCT TTGGTAAAGC TTCTCTCCCA TGAAGTATCT GATATACGTT GGCTGGCATC TTTGGGTCTG ATAAAGATAG GTAAAGAGGG GGTAAAGCCG CTTCTGCGGG CGCTTAGTTT GTCAGATGCC CGTTCCCCCT TCCTAAGGGA AGAAGCTCAC CATGTGCTTA CAGGGCTGAG GGATAAGGAG CTTAAGAGCA ATCTTTCCGG AGTTATAAAG GCTTTGGAAA GCAACTCCCC CCGCTCTGAT GCTCCGGTAG CCGCTGAGGC AGTACTTTTG AATCTGAAAC TTTAG
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Protein sequence | MTDTKFIAQQ LELLKDPNGL VRQSARLALE DLGKASVPYL VAKLDENKGD ALWENVKALS RIGDASSAGA LVKLLSHEVS DIRWLASLGL IKIGKEGVKP LLRALSLSDA RSPFLREEAH HVLTGLRDKE LKSNLSGVIK ALESNSPRSD APVAAEAVLL NLKL
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