| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DhcVS_1393 |
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| Symbol | rdhA |
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| ID | 8658318 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides sp. VS |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013552 |
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| Strand | - |
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| Start bp | 1287013 |
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| End bp | 1288500 |
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| Gene Length | 1488 bp |
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| Protein Length | 495 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | |
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| Product | reductive dehalogenase |
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| Protein accession | YP_003330820 |
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| Protein GI | 270308762 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00328103 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGAACT TTCACAGTAC ACTTACCCGT AAGGATTTCC TGAAAGGGAT AGGTATGGCC
GGAGCCGGAT TAGGTGCCGC CTCAGCCGTA ACCCCTATGT TCCATGACCT TGATGAGCTC
GTAGCTTCAA CACCCAGCAC CCGCAATTTA CCCTGGTTTG TCAAAGAGCG GGAGCACGGA
GACCCTACCA CCCCCATAGA TTGGGATATG ATTCAAAGAC GCCCTTATAC TTGGGCGCGC
ATGGATCCTA CCCTGCCGGT TTATGACAAT TTGAAGGCTA TCGGTGCGCC GGTGGCCAGA
TGGCTGGATT GGGAAGATAA AAAAGCCGAA GACGAAATTC TGTATGCCAA AGCCCGTGAA
GAATTTCCCG GTTTTGAGCC GGGTATAGAC GGGTTCGGGG ATATCCGGAC TACCGCTCTT
ACTCATGCTT CGGAAATGTT CGCTTTCGGT CAGTTTCCCC AGAGGATGAA TTTGGGCGGC
AATATGGTAG ACCTGGTAGC GGCAGTTCGG GCGGCCGGCG GTTACCTGGG TAGTACCGAC
AGCTATGCCG GACCTAAAAT GGTGCATACC CCTGAAGAGA TGGGCGGCAC CAAGTATCAG
GGTACTCCCG AAGATAACCT CCGAACCCTG AAAGCCGGTA TCCGTTATTT TGGCGGTGAA
GACGTGGGTG CTTTGGAACT TGATGATAAC CTTAAAAAAC TTGTCTTTAC TGTTGACCAG
TACGGCAAAA CACTTGAATT CGGGGATGTT GAGGAATGTA TTGAAACTCC CCGAAAAGTT
ACTATTCCCA ACAAATGCAA ATATATTTTC CTCTGGACTA TGCGTCAGCC ATACGAATGG
ACCCGCCGCC AGTCCGGCAG GTTTGAAGGA GCGGCTACAG AAACCAGTTA CGAACGCGCC
TACAATACCA AAGCCCACTT CCAGGATTTT GCCCGCGGCT TGGGTTACCA GATGATAAGT
GCCGGCAACA ACAGCCTTTC TCCGGCTGGT GCTTGGGCGG TTCTGGGCGG TCTGGGTGAA
CTTTCCCGTG CTTCATATGT AAACCACCCG CTTTACGGCA TTACCGTCAG AGTTACCTGG
GGTTTCCTGA CTGATATGCC GCTGCCACCC AGCCGTCCCA TTGATTTTGG TGCCCGCAGA
TTCTGTGAAA GCTGCGGTAT CTGTGCCGAG GCTTGTCCTT TCGGGGCTAT CAATCCCGGT
GAACCTACCT GGAGAGATGA TAATACCTTC GGCAACGCAG GTTTCCTGGG CTGGCGCTGT
GACTATACCA AGTGCCCCCA CTGTCCCATT TGCCAGGGTA CCTGTCCCTT CAATTCCCAC
CCCGGCTCGT TTATACATGA CATAGTCAAG GGCACTGTTT CCACCACACC TGTGTTCAAT
ACTTTCTTCA AGAATATGGA AAAGTCCTTC AAGTACGGGC GGAAGAATCC TGCTACCTGG
TGGGACGAAG TGGATGACTA TCCGTATGGG GTCGATACCA GTTACTAA
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| Protein sequence | MSNFHSTLTR KDFLKGIGMA GAGLGAASAV TPMFHDLDEL VASTPSTRNL PWFVKEREHG
DPTTPIDWDM IQRRPYTWAR MDPTLPVYDN LKAIGAPVAR WLDWEDKKAE DEILYAKARE
EFPGFEPGID GFGDIRTTAL THASEMFAFG QFPQRMNLGG NMVDLVAAVR AAGGYLGSTD
SYAGPKMVHT PEEMGGTKYQ GTPEDNLRTL KAGIRYFGGE DVGALELDDN LKKLVFTVDQ
YGKTLEFGDV EECIETPRKV TIPNKCKYIF LWTMRQPYEW TRRQSGRFEG AATETSYERA
YNTKAHFQDF ARGLGYQMIS AGNNSLSPAG AWAVLGGLGE LSRASYVNHP LYGITVRVTW
GFLTDMPLPP SRPIDFGARR FCESCGICAE ACPFGAINPG EPTWRDDNTF GNAGFLGWRC
DYTKCPHCPI CQGTCPFNSH PGSFIHDIVK GTVSTTPVFN TFFKNMEKSF KYGRKNPATW
WDEVDDYPYG VDTSY
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