Gene DhcVS_1318 details

Gene Information

• Locus tag: DhcVS_1318
• Symbol: rdhR
• ID: 8658243
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dehalococcoides sp. VS
• Kingdom: Bacteria
• Replicon accession: NC_013552
• Strand: +
• Start bp: 1216334
• End bp: 1217002
• Gene Length: 669 bp
• Protein Length: 222 aa
• Translation table: 11
• GC content: 41%
• Product: DNA-binding response regulator, LuxR family
• Protein accession: YP_003330745
• Protein GI: 270308687

Plasmid Coverage information

• Num covering plasmid clones: 39
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATTACC AAAACCCTGA GATACGGATA TTTGTTGTTG ACGACCACGA GGTTGTCAGG 
CACGGGTTAA AAACCATGCT GGAGACTGTG CCTGATTTTA TCGTTGTGGG AGAATCCGAT 
GGTAGCGAGG CTGTTGTTGA GAAAATATGT CAGTCTAAAG CGGATATTTT GTTGCTGGAT 
ATACGTATAG AAGGTTCTGA TGGCTTTCAA ATAGCATCTC AGGTAAAAAC TCGGTTGCCT 
GCGTTGAAAA TAATCCTTAT TTCTGGCTAC GATAGCAATC TGTATATTAC TGAATCTCTG 
CGTCATAAAA TCCGGGGGTT TATACCGAAA GGGTGTCAAA AAGAATACAT CTTTACTGCC 
ATAAGAATGG TAGCGCTGGG CGCAACCGTA TGGCACGGCG ATCAAATATT TCAGGCCATA 
CGAAATCTGA ATTCCGACGA AAACCAGATA ACCGTTTCCG AAGTTTCCGT CACTAACGCC 
TTGCTCGATC CACGCGAACT GCAAATACTC ACTTTAGTAT CTGCAGGAAA AACAAATAAA 
GCTATCAGTG CTGAATTGGA TATTTCTATA GATATGGTGA AAAAAACAGT ATCCAGACTA 
ATGCACAAAT TTAATTCTAC CAATCGGACA CAATTAGCCA CTGCCGGTTC TAAATTAAAA 
TTAGTCTAA 

 

Protein sequence

MNYQNPEIRI FVVDDHEVVR HGLKTMLETV PDFIVVGESD GSEAVVEKIC QSKADILLLD 
IRIEGSDGFQ IASQVKTRLP ALKIILISGY DSNLYITESL RHKIRGFIPK GCQKEYIFTA 
IRMVALGATV WHGDQIFQAI RNLNSDENQI TVSEVSVTNA LLDPRELQIL TLVSAGKTNK 
AISAELDISI DMVKKTVSRL MHKFNSTNRT QLATAGSKLK LV