Gene DhcVS_1254 details

Gene Information

• Locus tag: DhcVS_1254
• Symbol: trpC
• ID: 8658181
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dehalococcoides sp. VS
• Kingdom: Bacteria
• Replicon accession: NC_013552
• Strand: +
• Start bp: 1153802
• End bp: 1154581
• Gene Length: 780 bp
• Protein Length: 259 aa
• Translation table: 11
• GC content: 52%
• Product: Indole-3-glycerol phosphate synthase
• Protein accession: YP_003330684
• Protein GI: 270308626

Plasmid Coverage information

• Num covering plasmid clones: 45
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGATATTGG AACGTATAGT ATCCGACAAT CTGCCTGATT TGAAGCGACG GAAAGAGGAA 
CTGCCTCTTT TGAAACTGCA GGCATTGGTA GCGGACATAC CCTGTCCACC CCTTGACATG 
GCGGCAAGCC TGAAAGGCAA CGGCATTAAG CTTATTGCCG AGGTCAAAAA GGCCTCACCC 
TCAAAAGGGA TAATCCGGCC TGACTTTGAG CCGGTGGATA TTGCCCGCAT ATACGCCCGA 
AATGGGGCGG CCGCCATTTC GGTACTGACC GAAGAACACC ATTTTCAGGG CAGCCTTGAT 
AATTTAAAAC TAATACGTGA ATCCGGGGAG GCATTAAATC TGCCTTTGCT GCGGAAAGAT 
TTTATCCATG ACCCGTATCA GGTATATGAA GCCCGCCTGT ACGGGGCAGA CGCTATTTTG 
CTGATAGTGG CCATGCTTAC ACCCCAGAAA CTGGAGGAAC TGCTTTCACT CAGCCACACG 
CTGGGTATGA AATGCCTGGT AGAGGTGCAT ACCCGGCCTG AACTGGACAT AGCCCTCAAG 
AGCAATGCCC GGATTATCGG CCTGAATAAC CGTAATTTGC ATACATTTCA AGTGGACTTA 
AGCGTAACCG AAACCCTCCG CCCCCTGATA CCGCCTGAAC ACATAGTTGT CAGCGAAAGC 
GGCATTCAAA CCAGAGCGGA CATATCCCGT CTGGCAGAGC TGGGGGTAGA TGCGGTGCTT 
ATAGGGGAAG CCCTGACGGC CTCGGCTGAT ATTGCCGCCA AGATGAGGGA ACTGCTGTGA 

 

Protein sequence

MILERIVSDN LPDLKRRKEE LPLLKLQALV ADIPCPPLDM AASLKGNGIK LIAEVKKASP 
SKGIIRPDFE PVDIARIYAR NGAAAISVLT EEHHFQGSLD NLKLIRESGE ALNLPLLRKD 
FIHDPYQVYE ARLYGADAIL LIVAMLTPQK LEELLSLSHT LGMKCLVEVH TRPELDIALK 
SNARIIGLNN RNLHTFQVDL SVTETLRPLI PPEHIVVSES GIQTRADISR LAELGVDAVL 
IGEALTASAD IAAKMRELL