Gene DhcVS_1101 details

Gene Information

• Locus tag: DhcVS_1101
• ID: 8658031
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dehalococcoides sp. VS
• Kingdom: Bacteria
• Replicon accession: NC_013552
• Strand: -
• Start bp: 1021920
• End bp: 1022636
• Gene Length: 717 bp
• Protein Length: 238 aa
• Translation table: 11
• GC content: 46%
• Product: hypothetical protein
• Protein accession: YP_003330544
• Protein GI: 270308486

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.00638245
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTTCTGG ATAATGTGAA AATCAGGTCG GACAGATTTC CGGATAATAG CGTTTATCCC 
TTTAATCTGG ATGTACTGCA TAAGACACCT CAGATAGTAT TAGACAGACC GGTTACCTTT 
TTCATTGGCG AAAACGGCAG CGGCAAGTCT ACCCTGCTTC GGGCTATTTG CCGTAAGGCT 
GGTGTGCATA TCTGGGAGGA TACCAGCCGC CTGACGCTGG ATAATAACCC CTATGCGGAT 
AGTTTGTCAG ACTATCTGGA GCTTGGTTTG CCTAAGGGCG GGGTAAAAGG CTCTTTTTTT 
GATTCACGCA CCTTTCAGGA CTTTACCCGT TTTCTGGATG AATGGGCGGC GGCTTCCCCG 
GATATTTTAA AATACTTCGG CGGGGACTCC CTTACCAACC GTTCCCACGG GCAATCGCTG 
ATGAAATACT TTGAATCACG CTATAAGGTA AAGGGATTGT ATTTTATGGA TGAACCTGAG 
ACAGCTCTGT CACCCAAAAG CCAAATCATG CTGCTGAACC TTCTGAGTCA GGCATCCGCC 
TCAGACCATA ATCAATTTAT TATTGTCAGC CATTCGCCTA TATTGCTGGC ATGTCCCGGT 
GCTTCTATAT ACACGTTTGA TACTGCACCT GTCTCCAGTA TAGGCTATTA CGATACCCAG 
TATTACCGGG TCTACCGTGA TTTTCTGAAT GAGCCGGAGT CATTTATTGA AAAGTAG 

 

Protein sequence

MFLDNVKIRS DRFPDNSVYP FNLDVLHKTP QIVLDRPVTF FIGENGSGKS TLLRAICRKA 
GVHIWEDTSR LTLDNNPYAD SLSDYLELGL PKGGVKGSFF DSRTFQDFTR FLDEWAAASP 
DILKYFGGDS LTNRSHGQSL MKYFESRYKV KGLYFMDEPE TALSPKSQIM LLNLLSQASA 
SDHNQFIIVS HSPILLACPG ASIYTFDTAP VSSIGYYDTQ YYRVYRDFLN EPESFIEK