| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_4716 |
|---|
| Symbol | |
|---|
| ID | 7261745 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfitobacterium hafniense DCB-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011830 |
|---|
| Strand | - |
|---|
| Start bp | 5033118 |
|---|
| End bp | 5034653 |
|---|
| Gene Length | 1536 bp |
|---|
| Protein Length | 511 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 643564627 |
|---|
| Product | phosphoglyceromutase |
|---|
| Protein accession | YP_002461147 |
|---|
| Protein GI | 219670712 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0696] Phosphoglyceromutase |
|---|
| TIGRFAM ID | [TIGR01307] 2,3-bisphosphoglycerate-independent phosphoglycerate mutase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.0000025941 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCCTC TGCTCTTGAT GATTCTGGAC GGATGGGGTT ATAATCCCCA GAGCGCAGGC
AATGCTGTGG CTAAGGCCCC CAAGCCCCAT TTCGACAGAC TGCTTGAGGA GTATCCCCAT
ACCCTGATCG TTGCTTCCGG GGAGGAAGTG GGATTGCCCC CAGGCCAAAT GGGGAACTCG
GAAGTGGGGC ATTTGAATAT TGGGGCAGGC CGGGTGGTCT ATCAGGAATT CACCCGGATT
TCCCAAGCCA TAAGGACCGG TGAGTTTGCC CGGAATACGG TTTTGCAGGA AGCCATGGAA
CGGGTCAAGG ATGGGCCCAA TGCTCTGCAT CTGATGGGGC TGCTCTCCGA TGGAGGGGTT
CACTCCCATA GTGAACATCT TTTCGCCCTC CTGGCTATGG CCAAAACCAT GGGGGTTAAA
AAGGTATTCA TCCATGCCTT GTTGGACGGC CGGGATGTGC TGCCCCAAAG TGCCAAAGGG
TTCATGACCC AACTTAATAG CAAATGCCGG GAATTAGGCC TTGGCCAGGT GGCCACCGTC
AGCGGCCGTT ATTATATGAT GGATCGGGAT AAACGTTGGG AACGGGTGGA AAAGGGTTAC
CGGGCTTTAG TGAATGGGGA AGGTCTGAAA GCGCCTAATT CTTTGGCAGC CATTGAACAA
TCCTATGATG TCAGGGTCAC GGATGAGTTT GTGGCACCTA CAGTCATTGT CGACTCGGCA
GGGGAGGCTG TGGGACCCCT TCGGGACGGT GACAGTTTTA TTTTCTTCAA TTTCCGCTCC
GATCGGGCCC GGGAGATCTC TTATGCTCTC TTGGATGAAG AATTTACCGG CTTTGACCGG
GGAAGACCTT TGCAACTCCA TTATGTGTGT ATGACCGAAT ATGACGATAA GCTGAAAGGG
GCGGCCGTGG CTTTTCCGGC TCAGAACTTA GACAATACCT TGGGGGAGGT TCTGGCCAAA
CATCAGAAAA AGCAGCTGCG CATCGCTGAG ACAGAAAAAT ACGCCCATGT CACCTTCTTT
TTTAATGGTG GAGTAGAGGA GCCTTGTCCT GGGGAAACCC GCTGTCTTAT TCCTTCTCCT
CAAGTCCCTA CCTATAATCT GTTGCCGGAA ATGAGTGCTT ATGGAATTAC CGAGGAGCTC
TTAAAGCGTC TGGAAAGAGA AGAGGATGAG GTGATCATTC TGAACTTTGC CAACGCGGAT
ATGGTGGGTC ATACAGGAGA GTTTGAGGCT ACGGTCAAAG CCATCGCAGC GGTGGATCAG
TGTATCGGGC AAATCGTTCC CCAGGTTTTA GAGCGCCAGG GAACCGTCAT TATAACCGCC
GATCATGGCA ATGCGGAAGC AAAAGTGGAC CTGCAAACCG GCCAGCCCTT AACGGCCCAT
ACCACCAATC CGGTGCCCTT GATCCTGGTT AATGATCAGC TTAAGGGTAA AACCCTGCGG
GAAGGCGGGG CCCTGCGGGA TGTGGCGCCG ACCATGCTCC GGCTGCTGGA GATTCCGCAG
CCCCAGGAGA TGACTGGAAA GTCCTTGATT TGTTGA
|
|---|
| Protein sequence | MKPLLLMILD GWGYNPQSAG NAVAKAPKPH FDRLLEEYPH TLIVASGEEV GLPPGQMGNS
EVGHLNIGAG RVVYQEFTRI SQAIRTGEFA RNTVLQEAME RVKDGPNALH LMGLLSDGGV
HSHSEHLFAL LAMAKTMGVK KVFIHALLDG RDVLPQSAKG FMTQLNSKCR ELGLGQVATV
SGRYYMMDRD KRWERVEKGY RALVNGEGLK APNSLAAIEQ SYDVRVTDEF VAPTVIVDSA
GEAVGPLRDG DSFIFFNFRS DRAREISYAL LDEEFTGFDR GRPLQLHYVC MTEYDDKLKG
AAVAFPAQNL DNTLGEVLAK HQKKQLRIAE TEKYAHVTFF FNGGVEEPCP GETRCLIPSP
QVPTYNLLPE MSAYGITEEL LKRLEREEDE VIILNFANAD MVGHTGEFEA TVKAIAAVDQ
CIGQIVPQVL ERQGTVIITA DHGNAEAKVD LQTGQPLTAH TTNPVPLILV NDQLKGKTLR
EGGALRDVAP TMLRLLEIPQ PQEMTGKSLI C
|
|---|
| |