Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dhaf_4635 |
Symbol | |
ID | 7261664 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfitobacterium hafniense DCB-2 |
Kingdom | Bacteria |
Replicon accession | NC_011830 |
Strand | - |
Start bp | 4941223 |
End bp | 4941975 |
Gene Length | 753 bp |
Protein Length | 250 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 643564552 |
Product | transcriptional regulator, GntR family |
Protein accession | YP_002461072 |
Protein GI | 219670637 |
COG category | [K] Transcription |
COG ID | [COG2188] Transcriptional regulators |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.000503298 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAATTAG ATCCCTATAG CCCTGTTCCC TTACATGCAC AGCTTACGGA ATACATTAAA AACGAAATAT TAAAAGGCAA CTATACGGGA AAAATTCCTA GTGAGCGCGA GCTTATAGAG GAATTTAATG TAAGTCGGAC CACAGTGCGC GAATCAATTT CGACCTTAGT TCGTGATGAT TTTCTTGAAA AAAGACATGG GAGAGGGACC TTTGTTAATT TACGGCCTGT TCATGAAATG TGGCATGGTA ATTTAAAATC TTATACCGAA AACATAGAAG CAGCTGGAAT GAAACCTGGC GCAAAATTGC TCTTTTCAGG GATAAGAAAT AAACCGGAAA CAATAGCCAG AAAGTTTAAC AATGAATCAT TTTATTTCAT TGAACGCCTT CGCTATGCTA ATGATAACAT TATGGCTATT GAACGAAAGT TTTTTGATCT GGAAATTGGT AAAAAGTTAG CGGAATTTGA TCTTGATCAA GCTAATATTT ATGAAATTTT AGAGAATTCC CTGGGTGTTA CTCTTTGTGA AGCAGAGGAG ACCATTACCA GTCAAGTTCC CAGCTTAGAA GATGCCAAGT TACTAGGTAT AAGTAAATCT TCAAGTGTGC TTGTCACTGA ACGATCCACT TACAGCCCCG AGAAAAAGCT GATTGAAGTT GTCAATACCA CTTTTCGTGC TGATAAATAC GCGATTACAA TAAAAATGAA ACGTAATAAT AGTCGCAGTA AAACGATTTC TGTAGAAGAT TAG
|
Protein sequence | MKLDPYSPVP LHAQLTEYIK NEILKGNYTG KIPSERELIE EFNVSRTTVR ESISTLVRDD FLEKRHGRGT FVNLRPVHEM WHGNLKSYTE NIEAAGMKPG AKLLFSGIRN KPETIARKFN NESFYFIERL RYANDNIMAI ERKFFDLEIG KKLAEFDLDQ ANIYEILENS LGVTLCEAEE TITSQVPSLE DAKLLGISKS SSVLVTERST YSPEKKLIEV VNTTFRADKY AITIKMKRNN SRSKTISVED
|
| |