Gene Dhaf_4583 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_4583 
Symbol 
ID7261612 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp4879724 
End bp4880503 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content48% 
IMG OID643564500 
ProductABC transporter related 
Protein accessionYP_002461020 
Protein GI219670585 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1126] ABC-type polar amino acid transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000093937 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCAATA ATTCAATAAG TGGTGGTTCA ATGAGTAGTG AGCAAAGAGA AATTTTATTG 
GCAATCAAGG ATTTGTATAA AGAGTATGGG GGCAAACCCG TTCTTAAGGG GATTGATCTC
CAGGTCCCCA GAGGTGAGGT CATTGTGGTT TTAGGGCCCT CCGGATGCGG TAAAAGCACT
CTGCTCCGCT GCCTTAACGG TCTTGAACCC ATTCAAAAAG GAGATATCCT GCTGTCAGGT
CAAAGCCTGA TCAGAGGAAA AGTCGATTGG GAGCAGATTC GTCAGCAGAT CGGTATGGTT
TTTCAAAACT ATGATCTTTT TCCCCATATG ACGGTGATTG AGAATATTCT CCTGGGGCCT
ACAAAGGTAC AGAACAGGGA GCGCAGCCAA GTCATGGAGC AAGCCAAGGC CCTTTTGGAA
AGAGTGGGGT TATTCGATAG AATGGACGCT TGGCCAAGGG AGCTATCCGG AGGCCAGAAG
CAGAGAATCG CTATCGTCAG AGCCTTATGC ATGAATCCGG AGATCATGCT TTTTGATGAG
GTGACAGCAT CCCTTGATCC GGAAATGGTC CGGGAAGTTC TTGACGTGAT GCTGGGCCTG
GCCAAACAGG GAATGACCAT GATCATTGTC ACTCATGAGA TGGGCTTTGC CCAAGCCGTC
GCCGACCGGG TCGTTTTCAT GGATTCAGGT ACTGTTTGTG AAATTGCCGG CCCCCAGGAG
TTCTTCAATA ACCCACGCAC CGAGCGGGCG AAGCAATTTC TTAATATATT TCAATATTAG
 
Protein sequence
MSNNSISGGS MSSEQREILL AIKDLYKEYG GKPVLKGIDL QVPRGEVIVV LGPSGCGKST 
LLRCLNGLEP IQKGDILLSG QSLIRGKVDW EQIRQQIGMV FQNYDLFPHM TVIENILLGP
TKVQNRERSQ VMEQAKALLE RVGLFDRMDA WPRELSGGQK QRIAIVRALC MNPEIMLFDE
VTASLDPEMV REVLDVMLGL AKQGMTMIIV THEMGFAQAV ADRVVFMDSG TVCEIAGPQE
FFNNPRTERA KQFLNIFQY