| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_4324 |
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| Symbol | |
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| ID | 7261349 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfitobacterium hafniense DCB-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011830 |
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| Strand | - |
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| Start bp | 4587065 |
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| End bp | 4588549 |
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| Gene Length | 1485 bp |
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| Protein Length | 494 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 643564241 |
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| Product | choline/carnitine/betaine transporter |
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| Protein accession | YP_002460765 |
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| Protein GI | 219670330 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1292] Choline-glycine betaine transporter |
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| TIGRFAM ID | [TIGR00842] choline/carnitine/betaine transport |
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Plasmid Coverage information |
| Num covering plasmid clones | 85 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGAGTTG ACAAGAAGCA AAACACTGTA TTGTATATTT CTTCAGCCAT TGCCCTGTTG
TTTGTTCTGT GGGGAGTATT TTTACCTGAA AATATGGCCA ATGTGGTCAA TAAAGTCTTT
GCCTTATTAA CCACGAATTT CGGTTGGCTT TACCTTTTAG CTGTTGCAAT TTTTATTATC
TTTGTCTTTG GTATAGCCAT CAGCCGTTAC GGGAAAATCA AGCTGGGTGC CGATGACGAT
AAACCGGAAT TCAGCAATTT CCAATGGTTT GCCATGCTTT TCGGCGGAGG CATGGGCATT
GGTTTGGTCT TTTGGTCCGT TGCCGAACCC ATCATGCATT TTAACAGTCC GCCTTTCGGA
GAACCGGGAA CCGTAGAGGC TATGCAAACT TCCATGCGGG TGGTCTTCTT TCACTGGGGC
ATTCATGCCT GGGTTAACTT TGCTATCGCC GGTTTGGCTC TGGCCTACTT CCAATTCCGC
AAAGGGCTGC CCTTCCTGAT TAGCTCGGCT TTCTATCCCC TCATTGGCGA TCGGATTTAT
GGGCCGATTG GCAAGGCCAT CGATATTCTG GCTGTATTCG CCACTATTTT TGGAATTGCT
ACCAGTTTGG GCTTGGGTTC CAGCCAGATA GCCACAGGAA TACAGTACAT CTGGGGAATT
CCGGCCGGCC CTCTGACGAT TTCCCTTGTC ATTGCCGTGA TCACAGTTAT CTTTACCCTG
GCCACGGTCT CCGGTCTGCA TAAAGCCATG CAGTCGATTG CTAATGTAAA AGTTTGGTTA
TCCGTTGCAT TTATGGTTTT TATCTTCTAC TTTGGCGGCA AAGTCTTTAT CCTCAATACC
TTTACCCAAA GTTTGGGCGA TTATCTGCAG AATTTTGTCG GCCAAACCTT CTGGATGGCC
AATGAAAGCT GGGTAGGCGG CTGGACCATC TTCTACTGGG CATGGTGGAT CGCCTGGGCT
CCCTTTGTCG GTCAGTTTGT GGCACGGGTG TCGAAGGGGC GGACCATTCG GGAGTTTGTC
TTTGCCGTAA CCCTGCTGCC GGTCGGCTTC TCCTTTATTT GGCTGGCTAT CTACGGCGGA
GCAGCCTTTA ACCTGGACCA GATTTCCGGA GGATTTATTC AAAATGCTGT CAATGCTGAT
TACACCACGG CTTTGTTTGC CCTGCTGCAG CAGATGCCTC TCTACGCCAT AACCGGTCCT
TTGGCCATCC TGCTGATCGT GACTTGCTTT GTGGGTGCTG CCGACTCAGC TACCTACGTT
CTGGCTATGC TGACCTCCAA TGGAGATATG GATCCCAGCA AGAAACTGCG CAGCTTCTGG
GGGATTATGC AAGGAGCTAT GACCATTGTG CTCATTGTTG TGGGCGGTAC GGCTGCCCTG
AAAGCCCTTC AGACTGCCTC GATTGCTTCG GCCTTTCCTT TTATGCTGAT CATGCTGGTT
ATGTGTTATA GTATTCTTAA AGCTCTCAGG AGCGATCATC CCTAA
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| Protein sequence | MGVDKKQNTV LYISSAIALL FVLWGVFLPE NMANVVNKVF ALLTTNFGWL YLLAVAIFII
FVFGIAISRY GKIKLGADDD KPEFSNFQWF AMLFGGGMGI GLVFWSVAEP IMHFNSPPFG
EPGTVEAMQT SMRVVFFHWG IHAWVNFAIA GLALAYFQFR KGLPFLISSA FYPLIGDRIY
GPIGKAIDIL AVFATIFGIA TSLGLGSSQI ATGIQYIWGI PAGPLTISLV IAVITVIFTL
ATVSGLHKAM QSIANVKVWL SVAFMVFIFY FGGKVFILNT FTQSLGDYLQ NFVGQTFWMA
NESWVGGWTI FYWAWWIAWA PFVGQFVARV SKGRTIREFV FAVTLLPVGF SFIWLAIYGG
AAFNLDQISG GFIQNAVNAD YTTALFALLQ QMPLYAITGP LAILLIVTCF VGAADSATYV
LAMLTSNGDM DPSKKLRSFW GIMQGAMTIV LIVVGGTAAL KALQTASIAS AFPFMLIMLV
MCYSILKALR SDHP
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