| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_4319 |
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| Symbol | |
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| ID | 7261344 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfitobacterium hafniense DCB-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011830 |
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| Strand | - |
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| Start bp | 4580765 |
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| End bp | 4582369 |
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| Gene Length | 1605 bp |
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| Protein Length | 534 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 643564236 |
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| Product | choline/carnitine/betaine transporter |
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| Protein accession | YP_002460760 |
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| Protein GI | 219670325 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1292] Choline-glycine betaine transporter |
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| TIGRFAM ID | [TIGR00842] choline/carnitine/betaine transport |
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Plasmid Coverage information |
| Num covering plasmid clones | 71 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATATGG AAACCGATAC AAATTCCAAG AACAGTAAAG TTCTCAACAG GCAGCCTAAA
ACCGTGAATT GGGCCCTGTT GGGGAATATT GATCCCTATG TATTTATCAT TTCAGCTCTG
TTAGCGGTGG GTTTTCTCCT TTGGGGTGTG GTTGATTCTG AAGGTCTGAG CCATGTGTCG
AATACCATTC TTGACTACAT CATTCAGCAG TGGGGCTGGT TGTTCATTGT GGGGATTCTT
TTTTTCCTGC TTTTTTGCCT TTACTTAGCC TTCAGCCGCT ATGGCGATAT CAAACTGGGA
GGCCAGGATA CCTTACCGGA ATACAGCACC TTCTCCTGGT TTGCCATGCT TTTCGGTTGT
GGCATGGGAG TAGGGTTGGT ATTCTGGTCC ATTGCCGAAC CCATTAATCA TTTTCTCAAC
CCTCCGGCTT ATGTCAATGC CCTTAGCCCA TCTCAATCAG CGGAATGGTC CTTAGCTATC
TCCTTTTTTC ATTGGGGACT CAGTGCCTGG GCTTCCTTTG TTCTCATCGG GCTGGCCATG
GGGGTCATTA TTTTCCGCAA TAAGATGCCG ATGCTCTTGA GCAGCTGCTT TTATCCACTA
TTAGGGGATA GAATCTATGG CCCTATCGGC AAATTGATTG ATATTATTAC CCTTTGGGCG
TCGCTTTTTG GTATGACAAC CACCATCGGC CTGGGTACTA AGCAGTTGGC GGCTGGAGTT
ACTTATAATT ATGGCATTCC TCAAGGTATT CCCCTGCTTT TAGGGATATT GGCCATCGTC
ATTATCTGTT ATCTGATTTC GGCTTGTACT CCTAATCTGA AAGGAATAAA AATAGGTTCG
GATCTGAGTT TAATCGCCAC CGGGGGCTTG CTGCTCTTTG TCTTTTTGTT CGGTCCCACG
AAATTTATTA TGGATATGTT TGTCAACAGT ACAGGGGTTT ATATTCAGAA CTTTTTTGCC
ATGAGTCTCT GGACGGATCC CATAGAACAG AGCGGCTGGC TGGGCAGCTG GACAATATTT
TATTGGGCTT GGTGGATTGC CTGGGCCCCC TTTGTCGGCA TGTTCATCGC CAAGATTTCG
AAAGGGCGTA CGATCAAAGA ATTCGTCTTA GGCGCTTTGA TCGCTCCAAC TCTTCTGGAT
ATGATCTTTT TTGGCATTTT CGGAGGGACT TCGTTGAGCT TTGAACTTAA TCAAGTGTCC
CAGGGTATTT TGGCCAATGC TATTAATGTG GATATTTCCA GTGCGGTATT CGTCTTGTTT
GAACAGTTTC CCTTCCGGGA GATCACTTCA CTCATATTGA TCTTTGTCAT CTTTACCTTC
TTTGTCGTAT CTGCTGATTC CTGCACAATC GTCCTGGGTA TGCTCTCCAG CGGTGGGAAC
GAAAACCCCA GGATTCCCTT AAAGCTGTTT TGGGGAATAG CAATGGGAGC TGCTGCGGGG
CTGCTGCTGA TGCTTGGGGA TGGAGGGTTG GATGCCCTGC AAATGGCCTC GATCCTGGGT
GGATTTCCCT TCTTGTTCAT TATGTTTGCC ATTTGCTACA GTATTATTAA AACGTTAAGA
AGGGAAAAAT CGACAAACCT TGTTGGAATT CGAGAGAGGA ATTGA
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| Protein sequence | MDMETDTNSK NSKVLNRQPK TVNWALLGNI DPYVFIISAL LAVGFLLWGV VDSEGLSHVS
NTILDYIIQQ WGWLFIVGIL FFLLFCLYLA FSRYGDIKLG GQDTLPEYST FSWFAMLFGC
GMGVGLVFWS IAEPINHFLN PPAYVNALSP SQSAEWSLAI SFFHWGLSAW ASFVLIGLAM
GVIIFRNKMP MLLSSCFYPL LGDRIYGPIG KLIDIITLWA SLFGMTTTIG LGTKQLAAGV
TYNYGIPQGI PLLLGILAIV IICYLISACT PNLKGIKIGS DLSLIATGGL LLFVFLFGPT
KFIMDMFVNS TGVYIQNFFA MSLWTDPIEQ SGWLGSWTIF YWAWWIAWAP FVGMFIAKIS
KGRTIKEFVL GALIAPTLLD MIFFGIFGGT SLSFELNQVS QGILANAINV DISSAVFVLF
EQFPFREITS LILIFVIFTF FVVSADSCTI VLGMLSSGGN ENPRIPLKLF WGIAMGAAAG
LLLMLGDGGL DALQMASILG GFPFLFIMFA ICYSIIKTLR REKSTNLVGI RERN
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