| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_4022 |
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| Symbol | |
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| ID | 7261042 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfitobacterium hafniense DCB-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011830 |
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| Strand | - |
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| Start bp | 4272792 |
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| End bp | 4273796 |
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| Gene Length | 1005 bp |
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| Protein Length | 334 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 643563940 |
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| Product | pseudouridine synthase, RluA family |
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| Protein accession | YP_002460468 |
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| Protein GI | 219670033 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0000767359 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATTGGG AAGGGTTGAA TACCGGATTG GAAGCTGAAG AGCTGGAACT GGAACTGGAG
TTGGAGAACG GGGATAGAGA ACATCAGGAA GCGGAACAGA AGATGGAGTT CCGGCTTGCT
GAAGGAACCC GCTTGGATGT GGGGGTTACG GAAAGGGTAG GCAAAAGCCG GTCTTTCATC
CAGGGATTGA TCGAGGAAGG CCATGTCTTG GTCAATGGGG CCGCCAGAAA AGCCAATTAT
AAAGTGCGGG CCATGGATCA GATTGCGGTG GTGATTCCTC CTCCCAGGGA ATTGAAGGTG
GAGGCAGAGA ATATCCCTTT GGAAATCCTC TATGAGGATG AGGACGTCCT GGTCGTAAAC
AAGTCTCAGG GGATGGTGGT TCATCCGGCC CCAGGGGCCT GGACGAAGAC CCTGGTGAAT
GCCCTGCTTT ACCATTGCCG GAATCTCTCG GGAATTAATG GGGTATTGCG CCCCGGCATT
GTCCATCGTA TTGATAAGGA TACCTCGGGG CTCTTGGTCG TGGCCAAAAA TGACCTGGCC
CATCAAGGTT TAGCGGAGCA GATCAAAGCC CACAGTATGG CCAGACGCTA TCTGGCTATA
GTGCATGGAG TGGTGTTCGA GCCCTCGGGT ACGGTGGAAG CTCCCATCGG CAGAGATCCT
GCCGATCGTA AAAAAATGGC GGTGGTTTTT CAGAATGCCA AAGAGGCTGT GACTCATTAT
GAAGTCCTGG AGAGGTTTCG GGATTTTACC TTGCTTGAAG CCCGGCTGGA AACAGGCAGG
ACTCATCAGA TTCGGGTCCA TATGGCTTAT CTTAAGCATC CTGTGCTGGG AGATCCTCTT
TATGGACCAA GGAAGAATCC CTTCGGCCTG CAGGGGCAGA TGCTTCATGC CCAACTTTTA
GGGTTTCAGC ATCCGCGCAG CGGGGAGTAT ATGGAGTTCA GCGCCCCGGC TTCCGGGATG
TTTCAAAAGG TTCTGGAGGA GATTCGCCGG GATGATCTGG AATGA
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| Protein sequence | MDWEGLNTGL EAEELELELE LENGDREHQE AEQKMEFRLA EGTRLDVGVT ERVGKSRSFI
QGLIEEGHVL VNGAARKANY KVRAMDQIAV VIPPPRELKV EAENIPLEIL YEDEDVLVVN
KSQGMVVHPA PGAWTKTLVN ALLYHCRNLS GINGVLRPGI VHRIDKDTSG LLVVAKNDLA
HQGLAEQIKA HSMARRYLAI VHGVVFEPSG TVEAPIGRDP ADRKKMAVVF QNAKEAVTHY
EVLERFRDFT LLEARLETGR THQIRVHMAY LKHPVLGDPL YGPRKNPFGL QGQMLHAQLL
GFQHPRSGEY MEFSAPASGM FQKVLEEIRR DDLE
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