Gene Dhaf_3946 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_3946 
Symbol 
ID7260966 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp4187362 
End bp4188258 
Gene Length897 bp 
Protein Length298 aa 
Translation table11 
GC content56% 
IMG OID643563868 
Producthistidine kinase 
Protein accessionYP_002460396 
Protein GI219669961 
COG category[T] Signal transduction mechanisms 
COG ID[COG5002] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTCCTT GGATTCTGTG CGCCGGTTTG TCCCTGGCCG TGGCTGTGCT TTGTGTCAAG 
ATACGGCTTC TCCATCAAAG CATGGATGAA ATCCGCGTGG AGTTCAAGGA GCGTCTTACT
CTTGATACGA ACACGCTCAT CTCCATATCC TCCACCGATC CCCGGGCCAG GCGTTTAGCT
GCTGACATCA ATACCCAGCT GCGCTTGCTG CGCCGGCAGC GCCGGCACTA TCTGAACGGC
GACCGGGAGC TGAAGGAAGC GGTGACCAAC ATCTCCCATG ATTTGCGGAC TCCTCTCACC
GCCATCTGCG GATATTTGGA GCTGTTGGAG GAGGAGGAAA AAAGCGCCGC CGCGGCGCGT
TATCTGGCCT TTATCGCCAA CAGGACGGAG ACCTTGAAGC AGCTTACCGA AGAATTGTTC
CGCTATTCGC TTATCCTTGC TGCCCGGGAT ACCATGCAGA TGGAACTACT CAGTGTCAAG
GGGGTCCTGG AGGAAAGCCT TGCCGCCGTG TATCCGGCTT TGCTGGAACG CCGGATCACT
CCCGTCGTTC ACCTGCCGGA ACAGCCCGTT AAGCGGCGGC TGGATAAGGG GGCTCTGTCC
AGGATATTCG GCAATATTTT GAATAATGCC CTGAAATACA GCGACGGCGA TTTGGAGGTG
CGGCTCCGGG ACAATGGGGA GGTCCTGTTT ACCAATACAG CGGCTGCTTT AGACGAGGTC
CAGGTGGGTA AACTCTTCAA CCGCTTTTTT ACCGTTGAAG CGGCAAGGCA TTCCACAGGC
TTGGGGCTGG CTATTGCCAA GACCCTGGTC GAACAGATGA ACGGCGAGAT CACCGCCCAC
TACCGGGAGC AAAAGCTAAG CATCTGTATT CGATTTCCCT TGGCTGAACC GGACTGA
 
Protein sequence
MLPWILCAGL SLAVAVLCVK IRLLHQSMDE IRVEFKERLT LDTNTLISIS STDPRARRLA 
ADINTQLRLL RRQRRHYLNG DRELKEAVTN ISHDLRTPLT AICGYLELLE EEEKSAAAAR
YLAFIANRTE TLKQLTEELF RYSLILAARD TMQMELLSVK GVLEESLAAV YPALLERRIT
PVVHLPEQPV KRRLDKGALS RIFGNILNNA LKYSDGDLEV RLRDNGEVLF TNTAAALDEV
QVGKLFNRFF TVEAARHSTG LGLAIAKTLV EQMNGEITAH YREQKLSICI RFPLAEPD