Gene Dhaf_3894 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_3894 
Symbolgmk 
ID7260915 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand- 
Start bp4128190 
End bp4128792 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content49% 
IMG OID643563818 
Productguanylate kinase 
Protein accessionYP_002460346 
Protein GI219669911 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0194] Guanylate kinase 
TIGRFAM ID[TIGR03263] guanylate kinase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.000112061 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGAACAAA ATCATGGCTT ATTGATTGTT CTATCCGGTC CTTCCGGGGC GGGAAAAGGA 
ACCCTTTGCC AGGAACTGCT GAGACAGCTG CCTCAGGTAA AGTATTCCGT GTCGGCCACG 
ACACGCCAGC CCCGTCCTGG TGAAGTGGAT GGATTGCATT ATTATTTCCG TAGCCGGGAA 
GAATTTCAAA CCATGATCGA ACAGGATCAA CTTTTGGAAT GGGCAGAGTT TTGCGGTAAC 
TATTACGGAA CTCCCCAGTT CGCTGTGGAG CAGGCCATTC AAGCCGGGAA TGATGTCATT 
CTGGAGATTG AAATTCAGGG AGCTTTACAA GTCAAGCAGC GTTTCCCCCA GGGAGTGTTT 
ATTTTTGTCG TGCCGCCCTC CATGGATGAA CTTTCCCAGC GCATCCATAA ACGGGGCACC 
GAATCCGAGG AAGTGATTCA AAAACGGCTG CAGACTGCCG CTCGGGAACT GGAATATGTG 
AGCGAGTATG ATTATGTGGT CGTCAATGAT GAAATTCCTC TGGCAGTAGA CAAATTAAAG 
AGCATTCTGC TGGCTGAGAA ATGCCGTGTG AAAAGAAAAC CTTATGTATT TCAGGGGGTG 
TAA
 
Protein sequence
MEQNHGLLIV LSGPSGAGKG TLCQELLRQL PQVKYSVSAT TRQPRPGEVD GLHYYFRSRE 
EFQTMIEQDQ LLEWAEFCGN YYGTPQFAVE QAIQAGNDVI LEIEIQGALQ VKQRFPQGVF 
IFVVPPSMDE LSQRIHKRGT ESEEVIQKRL QTAARELEYV SEYDYVVVND EIPLAVDKLK 
SILLAEKCRV KRKPYVFQGV