Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dhaf_3794 |
Symbol | |
ID | 7260815 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfitobacterium hafniense DCB-2 |
Kingdom | Bacteria |
Replicon accession | NC_011830 |
Strand | - |
Start bp | 4030201 |
End bp | 4030935 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 643563718 |
Product | ABC transporter related |
Protein accession | YP_002460246 |
Protein GI | 219669811 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1126] ABC-type polar amino acid transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.0167031 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGCTTA AAATCAGCAA TCTGGAAAAA GCTTTTGCCG GCAAAACAGT GCTTAAAGAT ATCAATATCG ATTTGGAATA TTTTCGCTCC CTGGCGATTA TTGGCCCTTC AGGAGGGGGT AAATCCACGC TTTTGCGGAT GATCGCCGGT TTGCAAAGAC CTGATCGTGG GGAAATTCAC ATTAATGGCG AAAGAATCCA CTATTCGGAA ACGCTTTTGC ACGAATACCG CAAAACCATT GGCGTAGTCT TTCAGTCTTA CAATCTATTT CCGCACCTGA CAGCCCTGGA TAATATCACT CTGCCTTTGA CGGTTGTTCA TAAATTCAGC AAAGAGAAAG CCGAAATAAT CGCTTTGGAT CTGCTGGATC GGTTTCAATT AAAAGTGCAT ATGGATAAGA AACCCCATCA ATTGTCGGGA GGGCAGCAGC AGCGCATTGC GGTAGCCAGG GCCTTGTCCA TTGAATCCCG TTTTTTGCTC TTTGATGAAC CGACCTCGGC TCTCGATCCG GAGCTGACCA GCGAGGTTCT GGACATGATT AAAGAGCTTC AGGAGCAGGA CAAAGATTTA ATTCTTGTGA CTCATGAGAT GGGGTTCGCC CGTCAGTCCT GCGATTATGT ACTTTTTATT GCCGATGGTC AAATTATCGA ACATGGATCC AGCGCAAGAA TTTTTAAAGA GCCGCAAAGC CTGGAACTGA AGAATTTTCT TAATAAGATT TTAGAATGGA GATAA
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Protein sequence | MKLKISNLEK AFAGKTVLKD INIDLEYFRS LAIIGPSGGG KSTLLRMIAG LQRPDRGEIH INGERIHYSE TLLHEYRKTI GVVFQSYNLF PHLTALDNIT LPLTVVHKFS KEKAEIIALD LLDRFQLKVH MDKKPHQLSG GQQQRIAVAR ALSIESRFLL FDEPTSALDP ELTSEVLDMI KELQEQDKDL ILVTHEMGFA RQSCDYVLFI ADGQIIEHGS SARIFKEPQS LELKNFLNKI LEWR
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