Gene Dhaf_3794 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_3794 
Symbol 
ID7260815 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp4030201 
End bp4030935 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content44% 
IMG OID643563718 
ProductABC transporter related 
Protein accessionYP_002460246 
Protein GI219669811 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1126] ABC-type polar amino acid transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.0167031 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCTTA AAATCAGCAA TCTGGAAAAA GCTTTTGCCG GCAAAACAGT GCTTAAAGAT 
ATCAATATCG ATTTGGAATA TTTTCGCTCC CTGGCGATTA TTGGCCCTTC AGGAGGGGGT
AAATCCACGC TTTTGCGGAT GATCGCCGGT TTGCAAAGAC CTGATCGTGG GGAAATTCAC
ATTAATGGCG AAAGAATCCA CTATTCGGAA ACGCTTTTGC ACGAATACCG CAAAACCATT
GGCGTAGTCT TTCAGTCTTA CAATCTATTT CCGCACCTGA CAGCCCTGGA TAATATCACT
CTGCCTTTGA CGGTTGTTCA TAAATTCAGC AAAGAGAAAG CCGAAATAAT CGCTTTGGAT
CTGCTGGATC GGTTTCAATT AAAAGTGCAT ATGGATAAGA AACCCCATCA ATTGTCGGGA
GGGCAGCAGC AGCGCATTGC GGTAGCCAGG GCCTTGTCCA TTGAATCCCG TTTTTTGCTC
TTTGATGAAC CGACCTCGGC TCTCGATCCG GAGCTGACCA GCGAGGTTCT GGACATGATT
AAAGAGCTTC AGGAGCAGGA CAAAGATTTA ATTCTTGTGA CTCATGAGAT GGGGTTCGCC
CGTCAGTCCT GCGATTATGT ACTTTTTATT GCCGATGGTC AAATTATCGA ACATGGATCC
AGCGCAAGAA TTTTTAAAGA GCCGCAAAGC CTGGAACTGA AGAATTTTCT TAATAAGATT
TTAGAATGGA GATAA
 
Protein sequence
MKLKISNLEK AFAGKTVLKD INIDLEYFRS LAIIGPSGGG KSTLLRMIAG LQRPDRGEIH 
INGERIHYSE TLLHEYRKTI GVVFQSYNLF PHLTALDNIT LPLTVVHKFS KEKAEIIALD
LLDRFQLKVH MDKKPHQLSG GQQQRIAVAR ALSIESRFLL FDEPTSALDP ELTSEVLDMI
KELQEQDKDL ILVTHEMGFA RQSCDYVLFI ADGQIIEHGS SARIFKEPQS LELKNFLNKI
LEWR