Gene Dhaf_3275 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_3275 
Symbol 
ID7260291 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp3503999 
End bp3505156 
Gene Length1158 bp 
Protein Length385 aa 
Translation table11 
GC content53% 
IMG OID643563196 
ProductAltronate dehydratase 
Protein accessionYP_002459729 
Protein GI219669294 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2721] Altronate dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.549273 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACCTAT GGGGATTTCG GCGTCCTGAC GGACTCTTTG GCATACGCAA CCATCTTTTA 
ATCCTTCCTA CTTCAGTCTG TGCGACTACC GTTGCCGCTA ATATAGCCGC TCAAGTCCCC
GGTGCTGTCG CTATTGCCAA CCAACACGGC TGCTGTCAGT TAGGTGCCGA TTACGAGCAA
ACCTTACGGA CTTTAATCGG CATCGGGAGA AACCCCAATG TGGGAGCAGT CCTCGTTGTC
GGTTTAGGTT GTGAAGGCAT ACCGATCCTG CACACTGCAG AAGAAATCGC CAAATCCGGG
AAACCGGTGC AATCTCTGAT CATTCAGGAA CATGGCGGCA CTCTAAAAAC CACCGCCCTG
GGAGTCCAAG TCGCTGCTCA AATGGCCCGC ACCCTTTCTA TGCTGAAGAG GGAAGAGGCT
CCCCTCAGTG AGCTGTCGCT GGGGGTTGAA TGCGGCGGTT CTGATTTCAC TTCAGGTTTA
GCCGCCAATC CTGCCGCCGG CACAGCTTCT GATCTGGTGG TCAAGGCCGG AGGCACGGCT
ATGTTATCCG AAACCACGGA ATTCATCGGT GCGGAACATG TATTGGCCAA ACGGGCCAAA
TCACCGGAAG TCGCCGCCAA ACTCCTGGGA ATCGTCAAAG AAACGGAGCT GCGTGCCCGG
CAGCTTCATG TGGATTTGCG GGATGGCCAG CCCACTCCCG GAAATATTGC CGGCGGCATC
AGCTCCATCG AAGAAAAGTC TCTAGGCTGT ATTTATAAAG CCGGTCACTC CACCATTCAG
GATATTTTGG CCTATGGCGA AGCTCCCCAA GGCAAAGGCC TTTATGTTAT GGATACTCCC
GGTCAGGATG TGGAGTCCAT GATCGGAATG CTTGCCGGCG GCATACAGAT CATCGTATTC
ACCACAGGAC GGGGTACCCC CACCGGCTCA CCTATCGCCC CGGTTATTAA AGTCACGGCC
AATGCCGATA CGTATCTGAA CATGGCAGAC AATATCGACC TCGATCTCTC TCCCATCCTA
TCCGGCGCAG AAACCATTGA AGATAGCGGC CGCCGGATTT TCAAGGAGAT CATTGAAGTA
GCCAATGGTA AATTAACCAA ATCAGAAAGC TTAGGTCACC AGGAATTCGG CATCTTCCGC
ATTGGGCCGA CTTTTTAA
 
Protein sequence
MNLWGFRRPD GLFGIRNHLL ILPTSVCATT VAANIAAQVP GAVAIANQHG CCQLGADYEQ 
TLRTLIGIGR NPNVGAVLVV GLGCEGIPIL HTAEEIAKSG KPVQSLIIQE HGGTLKTTAL
GVQVAAQMAR TLSMLKREEA PLSELSLGVE CGGSDFTSGL AANPAAGTAS DLVVKAGGTA
MLSETTEFIG AEHVLAKRAK SPEVAAKLLG IVKETELRAR QLHVDLRDGQ PTPGNIAGGI
SSIEEKSLGC IYKAGHSTIQ DILAYGEAPQ GKGLYVMDTP GQDVESMIGM LAGGIQIIVF
TTGRGTPTGS PIAPVIKVTA NADTYLNMAD NIDLDLSPIL SGAETIEDSG RRIFKEIIEV
ANGKLTKSES LGHQEFGIFR IGPTF