Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dhaf_3083 |
Symbol | |
ID | 7260094 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfitobacterium hafniense DCB-2 |
Kingdom | Bacteria |
Replicon accession | NC_011830 |
Strand | - |
Start bp | 3299579 |
End bp | 3301732 |
Gene Length | 2154 bp |
Protein Length | 717 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 643563003 |
Product | protein of unknown function DUF162 |
Protein accession | YP_002459542 |
Protein GI | 219669107 |
COG category | [C] Energy production and conversion |
COG ID | [COG1139] Uncharacterized conserved protein containing a ferredoxin-like domain |
TIGRFAM ID | [TIGR00273] iron-sulfur cluster-binding protein |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.000122651 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCTAATG CACATTTTAA ACAAGAAATC GAGAATGCCC TGGAGAATGA TATCCTTAGA GGGGCATTAG GCCGTTTCGG GGATGTCTAT GGGAAAAACC GGGAACAAGC TTACCAAGGG TATGATTTTG CTGCCCTGCG TGAAAAAGTG GTCGAAGTAA AATCCTATGC CGCCGAGCAT TTGGATGAGA TGATTGAGCA ATTCGAAAAG GCTGCCACAG CGCGGGGGGC TAAGGTTTTT CATGCCGCAA CAGGTGACGA TGCCAAACAA TATATTATCG AGCTGGCCAA ACAACAAAAG GTTAAAAATA TTGTCAAGTC CAAATCCATG GCTTCTGAAG AAATTCATCT CAATGCTGCT CTGCTTAAAG AAGGCTTTGA TGTTCAGGAA ACAGATTTAG GGGAATGGAT CGTCCAGTTA GCAGGGCAGA GACCTTCCCA CATGGTAATG CCGGCTATCC ATATGACCAA AGAGCAGGTT GCAGACACCT TTAATAATAA TCTCAGCTAT ACCAGCGATC CGGTGATCGC CAAATTGGTG AAGACGGCCC GCCAGGAAAT GCGCAAAAAG TTCGTGGAGG CGGATATGGG CATTTCGGGA GCCAATATCG CGGTGGCTGA AACAGGCACC CTGATGATGA TGACCAATGA AGGAAATGCC CGCTTAACGG CTACCTGGCC TCGTGTCCAT GTTTTCCTGG TCGGGTTGGA GAAATTTGTC CCGAACTTTG AAGATGCGGG ATATATCCTG CAGACCCTGC CCCGGAATGG CACAGCTCAG CAGCTTACCA GTTATGTAAC CATGATCACC GGCCCTAATC CTACTTATTA TCCCGACGGT TCCATAGAAG ATAAAGAATT TCATATTATT CTTATGGATA ATGGCCGGCG CAAAATGTAT GCCGATGAAC AATTCAAACA AGTGTTCCAA TGTATCCGTT GTGCGGCCTG TTTAAACGTT TGCCCGGCTT TCCAGCTGGT AGGCGGACAT GTTTACGGAC ATATTTATAC CGGGGGTATC GGCACCATTT TGACCGCTTT CCTTAATTCG GAAAAGGATG CCGAGAATCC GCAGAATCTC TGTCTCCAAT GCGGCAAATG TACAGAAGTA TGTGCCGGTA AACTGGACAT CCCGGGAATG ATCCTGGAGA TTCGCAATCG CATCGGTGAT CAAAAGGGTT TGCCCATGAC TCCGAAATTC ATTCTGGATG TGGTCTCTAA CCGACGCCTC TTCCACTCTT TATTGCGTGT GGCCTCCAAG GCCCAGCTGC CTTTTTCCAA AGGTCAGCCC ACCATTCGCC ATTTGCCTTT CTTCCTGTCA GGACTGACGG AAAAGAGAAG CCTGCCCACG ATTGCCGATG TTCCCTTCCG GGATGTGATC AAGAAGATGA ATCAGGATGT TAAGAATTCT AAAGGCACCA TTGCCTTCTT TGGCGGTTGC CTTGTGGACT TTGTCTATCC CAAAATCGGG GAAGGTGTCG TCAGGGTTTT AAATGAAAAA GGGTATAAAG TAACTTTCCC GGAAGGCCAG TCCTGCTGCG GGGCTCCCGC ATCTTATATG GGTGACCGTC AAAACGCCCG CAAATCAGCG ATCATGAATA TCGAGGCCAT GGATGCCGAA AAAGTGGATT ATGTGGTTTC GGCCTGCCCC ACCTGTACCC ATGCTTTGAT TGACAGTTTT AGAGAACTCC TGGCCGACGA TCCGGCTATG CTCAAACGTG CCGGAGAGCT CAGCAGGAAA TCCATGGACT TTGCCAAGCT TCTGACCATC TTAGGCGGTC TTGAAGAAGG GGGAGACGGA GTCCCCTTAA AGGTTACGTA TCATGATTCC TGTCACTTAA GACGGAAAAT GGGGGTCATT GAGGAACCGC GGAACATCCT TTCCAATATC AAGGGTGTCG ATCTGGTGGA AATGAATGAG TCGGATCGTT GCTGCGGATT TGCCGGCTCT TATTCCATCA AATTCCCGGA AATGTCCGGA CCGATTCTGG AAAGAAAACT TCGCAATATT GAAGCCACCG GGGCGGATGT TGTGGCTGTG GATTGCCCGG GATGCCTGAT GCAGATTAAT GGCGGATTGG ATCAAACAGA CCTGAAGGTC AAGGTAAAAC ACACCGCAGA GTTGCTTCTG GAAAAACGCC AAAAGCAAAA ATAA
|
Protein sequence | MANAHFKQEI ENALENDILR GALGRFGDVY GKNREQAYQG YDFAALREKV VEVKSYAAEH LDEMIEQFEK AATARGAKVF HAATGDDAKQ YIIELAKQQK VKNIVKSKSM ASEEIHLNAA LLKEGFDVQE TDLGEWIVQL AGQRPSHMVM PAIHMTKEQV ADTFNNNLSY TSDPVIAKLV KTARQEMRKK FVEADMGISG ANIAVAETGT LMMMTNEGNA RLTATWPRVH VFLVGLEKFV PNFEDAGYIL QTLPRNGTAQ QLTSYVTMIT GPNPTYYPDG SIEDKEFHII LMDNGRRKMY ADEQFKQVFQ CIRCAACLNV CPAFQLVGGH VYGHIYTGGI GTILTAFLNS EKDAENPQNL CLQCGKCTEV CAGKLDIPGM ILEIRNRIGD QKGLPMTPKF ILDVVSNRRL FHSLLRVASK AQLPFSKGQP TIRHLPFFLS GLTEKRSLPT IADVPFRDVI KKMNQDVKNS KGTIAFFGGC LVDFVYPKIG EGVVRVLNEK GYKVTFPEGQ SCCGAPASYM GDRQNARKSA IMNIEAMDAE KVDYVVSACP TCTHALIDSF RELLADDPAM LKRAGELSRK SMDFAKLLTI LGGLEEGGDG VPLKVTYHDS CHLRRKMGVI EEPRNILSNI KGVDLVEMNE SDRCCGFAGS YSIKFPEMSG PILERKLRNI EATGADVVAV DCPGCLMQIN GGLDQTDLKV KVKHTAELLL EKRQKQK
|
| |