| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_3054 |
|---|
| Symbol | |
|---|
| ID | 7260065 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfitobacterium hafniense DCB-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011830 |
|---|
| Strand | + |
|---|
| Start bp | 3274375 |
|---|
| End bp | 3275763 |
|---|
| Gene Length | 1389 bp |
|---|
| Protein Length | 462 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 643562974 |
|---|
| Product | phosphoribulokinase/uridine kinase |
|---|
| Protein accession | YP_002459513 |
|---|
| Protein GI | 219669078 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0572] Uridine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 40 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGTCA TGGAAACGAC CCATCGTCAA TATCGTCAGA CCCTTATTTT TGGCTTGATT
AGGATTGTGG AGGAGCTTTT TCCTCAGGAG GAAATAAAGA TTCAATACTC CATTTTGGAT
GGTATTTATT GCGAGTTAGA GAACTCACCT CTTTCGCCTC GGGAAGTAGC GCAAATCGAG
GAAAAACTCC ATCACTGGTT GGAGTCTAAG CCGAAGATCA TGTCCTGTGC GGAAGAAGAT
GGCTTCTTTC ACACGAAGGT CAATCATATC TTCGTCAAGT CTCTTTATCC CGCTATGCAT
CCGGCAGATA CCTATTATCC TTTTACCCTC ATCTTCTATC ATCCCGGCTT TATTTTGCTC
TTTTCCAATC CTGAGCATCC CTGCGAGCTG CCCAATTTTG TACCACCGGA AAAATTAGCC
GCTACTTTCC TGGAGTCCCA GCGTTGGGTG GAAAACCTAC ATTTGGATAA GGTGGGTTCT
ATTAACCTTA ATATCCGGAA AGGCAAGACC ACAGAATTAA TCTCTTTAGC CGAAGCCTTG
CATGAGAAAA AAATTTCCTT AATCGCTGAT CGCATTCTCG AACAGCGAAG GAACCTCCGC
ATTATTCTCA TTTCCGGTCC CTCTTCCTCC GGGAAAACCA CCTTTGCCCA ACGTCTGTCC
ACACAGCTTC AGGTTAATGG CATCCGCCCT ATTGCTTTGT CGTTGGATAA TTATTTCTGC
GATCGGGAAC ACACGCCTCT TGATGAGTAT GGACAATATG ACTTTGAAGC TCTCGAGGCT
CTCGATCTCC CCTTGCTGAA CCAGCATGTC AAGGCCTTAA TCCATGGCGA GGAGATTGAG
TGCCCTATTT TCGATTTTGT GGCAGGCCGT CGTCAACCCG AGGGTATACG CATGAAATTA
GAGCCTGATG AAATATTGGT CATGGAGGGT ATTCATGCCC TCAACCCCCG GCTTTTGCCT
TCCCTGGAGC GCTCCCATCT CTTCAAAATC TATATCAGCG CTCTTTTTCA ACCCAATATC
GATACTCATA ATCGTATCTC CACAACGGAC GTACGCCTGA TTCGCCGCCT GGTTCGTGAT
GACAAATATC GTGGCATCAA CCCGGAAAAA ACCCTCAATC AATGGTCCAG CGTGCGGCGG
GGGGAAAACA ACAATATATT TCCCTATCAA GAGGAAGCGG ACGTTATGTT CAATTCCAGC
CTGCTCTATG AATTAAACGC TCTTAAGGCT TATGCTGAAC CGCTTTTAAT CAGCATTCCT
AAAGATCATC CCTATTACGC CACCGCCTCC CATCTCTTAA GAGTGCTTTA CCACTTTGAA
ATCCTGGATA TAGCCAAAGT CCCCTTTAAT TCTATCTTGC GGGAGTTTAT TGGCGGCGGG
ATCTACTAA
|
|---|
| Protein sequence | MSVMETTHRQ YRQTLIFGLI RIVEELFPQE EIKIQYSILD GIYCELENSP LSPREVAQIE
EKLHHWLESK PKIMSCAEED GFFHTKVNHI FVKSLYPAMH PADTYYPFTL IFYHPGFILL
FSNPEHPCEL PNFVPPEKLA ATFLESQRWV ENLHLDKVGS INLNIRKGKT TELISLAEAL
HEKKISLIAD RILEQRRNLR IILISGPSSS GKTTFAQRLS TQLQVNGIRP IALSLDNYFC
DREHTPLDEY GQYDFEALEA LDLPLLNQHV KALIHGEEIE CPIFDFVAGR RQPEGIRMKL
EPDEILVMEG IHALNPRLLP SLERSHLFKI YISALFQPNI DTHNRISTTD VRLIRRLVRD
DKYRGINPEK TLNQWSSVRR GENNNIFPYQ EEADVMFNSS LLYELNALKA YAEPLLISIP
KDHPYYATAS HLLRVLYHFE ILDIAKVPFN SILREFIGGG IY
|
|---|
| |