Gene Dhaf_2998 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_2998 
Symbol 
ID7260008 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand+ 
Start bp3220161 
End bp3221147 
Gene Length987 bp 
Protein Length328 aa 
Translation table11 
GC content48% 
IMG OID643562917 
Productperiplasmic solute binding protein 
Protein accessionYP_002459457 
Protein GI219669022 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0803] ABC-type metal ion transport system, periplasmic component/surface adhesin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones8 
Plasmid unclonability p-value0.000000688581 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTTCGT TCGTTAAACA TTCCCATTGG CTAAAACTAT TCCTGATAGC TTCCCTTGTC 
TTCTTGGCAA CAGGATGCTC TGCTGAAAAA CCTGTCAGCA CCATGAATCA GAAGGTCGTC 
ATTACCAGCA TTTCCCCTCT GGCCGATCTG ATTAAAAATG TAGGTGGAGA GAGCATCCAG 
GTGATCAGTT TGGTTCCGAC CGGGAGCGAT CCCCATACTT ACGAACCTAC GCCCGAGGCG 
GTACGCCAGG TGACCGGGGC CAAGCTCTTC TTCGCCAACG GGGTCGGCCA GGAAACTTAT 
TTAGAAAAGC TCATCACCAA TTCTCAGAAT AAGGATCTGC GCACGGTGAT TCTGGCCGAT 
GGATTAGAGA TACTGGGCAT TGATGACCAT GATAGTGACC ATGAGGAAGA GAGTGCTCAC 
GACGAAGCTG AAGTCCATAG AGAAGGTGAT GGCCATGACC ATTCCCAGGG AAACCCTCAC 
CTTTGGCTGG ATGTAAAAAA TGCCCAACAT TATGTAAAAT CTATTCGTGA TGCCTTGATT 
GAGACCTATC CCCAGGATCA GGAAATTTTT AAAACCAATG CCGAAAACTA TCTGCGGGAA 
CTGGAAGCAT TAGATCAGTG GATACAGGAA CAAATTCTTA CGATTCCCCA GGAGAACCGG 
GATTTGATCG TCTACCATGA TGCCTGGGTC TATTATACAG AGCGGTACGG ACTCACTGTC 
CTGCGGCCGG TGGTTCACGG AGATGAGTCT GAACCTTCGG CAAAGGATTA TGCTCAGCTC 
ATCGAATTGA TTAAAGAGCA TCAGGTCAAG GCTATCTTTG GTGAAGTGGG TTTCAATACC 
AAGCTTGTTC TGCAACTGGC CCAAGAAACC GGGATTAAGG TCGTGGAAGA TCTGTATAAT 
GATACTCTTG GCGTTACGCC GGAAACCGAC AGCTATATCG GGATCATGAA GCACAACACC 
ACAGCCATTG TCACAGCGCT TAAGTAA
 
Protein sequence
MRSFVKHSHW LKLFLIASLV FLATGCSAEK PVSTMNQKVV ITSISPLADL IKNVGGESIQ 
VISLVPTGSD PHTYEPTPEA VRQVTGAKLF FANGVGQETY LEKLITNSQN KDLRTVILAD 
GLEILGIDDH DSDHEEESAH DEAEVHREGD GHDHSQGNPH LWLDVKNAQH YVKSIRDALI 
ETYPQDQEIF KTNAENYLRE LEALDQWIQE QILTIPQENR DLIVYHDAWV YYTERYGLTV 
LRPVVHGDES EPSAKDYAQL IELIKEHQVK AIFGEVGFNT KLVLQLAQET GIKVVEDLYN 
DTLGVTPETD SYIGIMKHNT TAIVTALK