Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dhaf_2282 |
Symbol | |
ID | 7259251 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfitobacterium hafniense DCB-2 |
Kingdom | Bacteria |
Replicon accession | NC_011830 |
Strand | + |
Start bp | 2466128 |
End bp | 2466694 |
Gene Length | 567 bp |
Protein Length | 188 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 643562169 |
Product | 2'-5' RNA ligase |
Protein accession | YP_002458749 |
Protein GI | 219668314 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1514] 2'-5' RNA ligase |
TIGRFAM ID | [TIGR02258] 2'-5' RNA ligase |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00000000216572 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTGGATC AAAACATCAG AGCCTTTCTG GGAATTGACT TTACCGAGGA AGTGAAAGAT GAAATCCATG AATTGCAGCA GAACTTGAAA GGTTATGCCT TAAAAGGGCG ATGGAAGGGG CGGGATAATT TTCATCTTAC CTTAAAGTTT TTGGCTCAAA TCTCTTTTGC TCAAAAAGCT CAGATAGATG AATCCCTGCA GAGCTTATGC CGCAAGGAAA AACCCTTTAA TTTAGAGTTG AAGGGTCTGG GAGTATTCGG CGGCAAAGAA TCCTGCCGGG TGCTATGGCT GGGCTTAGCC GGTGATATGC AGGATTTGAG ATCCCTCCAT AAAAAAGTGG ATCAGGTTCT GACCCCTCTG GGCTTTCCTC CCGAAAGAAG GCCCTTTAGT CCACATATTA CTCTGGGACA GGATATTGTG TTTGCAGGCG GTTTTGAGGA AATCCAGGCA AAGGTCGGAG GTTTTGAGTT CACTCCAACT CATGTAGAAA GGATTCACCT CTTTAAAAGT GAGCAAGTTC AGTTCAAAAG AATCTATACA AAGCTCGCGG ATTATTCCCT GGGTTAA
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Protein sequence | MVDQNIRAFL GIDFTEEVKD EIHELQQNLK GYALKGRWKG RDNFHLTLKF LAQISFAQKA QIDESLQSLC RKEKPFNLEL KGLGVFGGKE SCRVLWLGLA GDMQDLRSLH KKVDQVLTPL GFPPERRPFS PHITLGQDIV FAGGFEEIQA KVGGFEFTPT HVERIHLFKS EQVQFKRIYT KLADYSLG
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