| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_2197 |
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| Symbol | |
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| ID | 7259166 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfitobacterium hafniense DCB-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011830 |
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| Strand | + |
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| Start bp | 2374915 |
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| End bp | 2376537 |
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| Gene Length | 1623 bp |
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| Protein Length | 540 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 643562087 |
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| Product | transcriptional regulator, PucR family |
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| Protein accession | YP_002458667 |
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| Protein GI | 219668232 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG2508] Regulator of polyketide synthase expression |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000000143617 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCATAA CGGTAGAGGA TTGTTTGCAG CTTTCGGTGC TGCGGGAGGC AGAGGTGGTG
GCAGGGGCAA AAGGGCTGAA TAATATCGTT GCCCATGTTT CTGTTTTAGA ATGGTCCAAC
TCTTTAGCCT TGAAAAATGG TATTTTTCTG GGTAATGAGA TTGTTATTAC CTGCTTTCAT
TATGCCAAGG ACGATGTTGA TGCCCAATGT CAGGTGGTCA GAGATCTCAG CGCAGCCGGT
GAGGTGGGGA TGATTCTTTA TTATGTGGGA ATTGTCCTGC CGGATATCGA TGCAAGATTG
ATTCGTACTG CCGACGAATT GGGGTACCCC TTGATCTGTA TGCCGAGAAA CCGTTTCGAT
TATCGTTATA GTGAGGCAAT CACGGAAATT ATGGAAGCGG TCTTTAAAGA TCAGATGAAG
GAAAAATATT ATGTTAAGGA TATGCTGGAA CGTCTAGCGA TGCTGCCGGA AAGACAGCGG
ACCATCGGCA ATGTTCTGCG CATGCTCAGT GACAGATTGT ACTGCTCTAT TATTCTTTGT
GATCGGGAAT TCAAGCTTTT GGATGCGGCG ACATGGCCGA CTACAGCGAA TTTGAATCTG
CCTGAGATCT TGAATTTGTA TAAAAATACA GTGCTTTCCA GGCCGGGAGT GAACAACCTG
GAATTCACCT ATGACAATGA GGTGATGGCT GCCAGATCCC AGCCGATTGC CACTGATGAC
GGGTATAGTA TGAATCTGAT TTTTTTGAAT CTCCCGGAAA AAAAGGTTTT GGGGGATGCT
ATTGCCCAGG CAGCGGAATT GATTCAGCTG TCAAGCAGTA TCTGGAATTT CGATATAAGG
CAGGAAGGCC ATAGGGAAAT GCTCAAAGCC TTTTTCTATG ATGAACCCAT CAAGCTCAAG
CGCATTGCCA ATGGGCTGCA CATTGACATT GATCGGCTTC AAACTATGTG GGTGTTGAAA
AGCAAGGCGG ATTCCCCGAC CAGGGAGGCC TTGACCTTAA AGAACAGCCG GCTTTTAGCT
TTGTTGAAAC ATTTTTTTAA TGAGCACCAT ATTCATGCGA TTGCCGATCA TTTTGAAGAT
AATGTGGTGG CGCTGATTGA GCCTCCTTAT GGGGAAACGA CCATGACCTC TTTTTTAGAA
GAATTTATGA AGACGGTTCA AGATGAATCC GTCAGGGCTT TTCCGGTAAA CTGTCCCGGA
GAAAATGCGG CAGGGGCTTT TCGCAAGGCT TATTTTGAAA TTCAGGATAA TGATGGAAGT
GCTATGACAA TCTATCCAAG CAAACGCATC ATCAACACTC ATGAAATTGA GTTCTCCGGC
TTATGCAGAG AGATTGCCGA AAAAGGAAAA GAGGCAATTG ACGAAAAACT CAAAGTACTT
CGCGCTTTGG GAGCTCAGGA TGATTTTGCA GGCAAGGAAT TGGTCTCTAC GTTGGAAGTT
TTTCTTCTGG ATGCGGAAGC CAATGTGGAA CAAACGAGCA AGCTGTTGTT TCTGCACAAA
AGCACGATAA AATACCGGAT TAAAAAGATT AAGGAATTAT TAGGCTGTGA TATTGCCAAG
CTTCCTGAAG CTTACAGCTT ATATGTAGCA GTGGCTGTGA AGCGGCTGAT TGCAAGCTTA
TAA
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| Protein sequence | MSITVEDCLQ LSVLREAEVV AGAKGLNNIV AHVSVLEWSN SLALKNGIFL GNEIVITCFH
YAKDDVDAQC QVVRDLSAAG EVGMILYYVG IVLPDIDARL IRTADELGYP LICMPRNRFD
YRYSEAITEI MEAVFKDQMK EKYYVKDMLE RLAMLPERQR TIGNVLRMLS DRLYCSIILC
DREFKLLDAA TWPTTANLNL PEILNLYKNT VLSRPGVNNL EFTYDNEVMA ARSQPIATDD
GYSMNLIFLN LPEKKVLGDA IAQAAELIQL SSSIWNFDIR QEGHREMLKA FFYDEPIKLK
RIANGLHIDI DRLQTMWVLK SKADSPTREA LTLKNSRLLA LLKHFFNEHH IHAIADHFED
NVVALIEPPY GETTMTSFLE EFMKTVQDES VRAFPVNCPG ENAAGAFRKA YFEIQDNDGS
AMTIYPSKRI INTHEIEFSG LCREIAEKGK EAIDEKLKVL RALGAQDDFA GKELVSTLEV
FLLDAEANVE QTSKLLFLHK STIKYRIKKI KELLGCDIAK LPEAYSLYVA VAVKRLIASL
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