Gene Dhaf_1876 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_1876 
Symbol 
ID7258845 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp2006929 
End bp2007714 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content53% 
IMG OID643561773 
Productbeta-lactamase domain protein 
Protein accessionYP_002458353 
Protein GI219667918 
COG category[R] General function prediction only 
COG ID[COG1235] Metal-dependent hydrolases of the beta-lactamase superfamily I 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones73 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGAGTCA AGTTTACATT AATGGGAACC ACTGCCGGAC TCGGTGTTCC GGCTTTTCAT 
TGCAACTGTA TAGCTTGCCG GGAAGCCCGG GCCGACCCTT TTTGGGCCAG AACCCGCAGC
GGGGCGGTTC TGGAGACGGG AAAAGAGAAC ATTCTCATCG ACGCCTCCCC TGATTTAAGC
AAGCAATTGC TCAGGGAACG GATTCAATCT GTTGATTATC TGTTCGTTAC CCATTGGCAT
TATGATCATT TCGGTGGTAT CGGGGATCTG GAATACTATG TCAAGCTGGA ACGGAAGCGG
CCGGTTGCCC TGTTTTTACC GCCAAGCGCT GTAGATGACT TCGCTAAGGC CTATCCTTTT
TTGGAAGAGG TCTTTGTGAT CGAACCCTGG GAGTTCGGCA AAAGCTACGC TTTTGAAGGC
ATAGAACTGA CCGTTTTACC GGCCAGGCAC AGTATCGAGA CCGGAGGCAT CCTCCTGGCA
GGAGCAAAAA GAGCAGCTTA TTTTACAGAT ACGTCCGGGC TGCCTGCCCC AACCGCCCGG
CAGCTTCAAG GTGTGGATAC CCTGATCTGC GACGCCACCT TTAACGGCGC CAACTGGTTT
CCCCATAGCC ATATGAATTG GCAGGAAGCT ATTGCCTTAG GGGAGAGCAT CCGGGCCCAG
CATACGGTAT TAACCCATCT GGCCATGCAC TACAGTACCC CGATCACAGC GGCTCAGCTC
CAGGAGAAAT TAAAGGATTA TGCCCAGGTG TCCCTGGCCT ATGACGGCAT GGTTCTGACA
ATCTGA
 
Protein sequence
MGVKFTLMGT TAGLGVPAFH CNCIACREAR ADPFWARTRS GAVLETGKEN ILIDASPDLS 
KQLLRERIQS VDYLFVTHWH YDHFGGIGDL EYYVKLERKR PVALFLPPSA VDDFAKAYPF
LEEVFVIEPW EFGKSYAFEG IELTVLPARH SIETGGILLA GAKRAAYFTD TSGLPAPTAR
QLQGVDTLIC DATFNGANWF PHSHMNWQEA IALGESIRAQ HTVLTHLAMH YSTPITAAQL
QEKLKDYAQV SLAYDGMVLT I