Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dhaf_1801 |
Symbol | |
ID | 7258770 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfitobacterium hafniense DCB-2 |
Kingdom | Bacteria |
Replicon accession | NC_011830 |
Strand | - |
Start bp | 1927219 |
End bp | 1928907 |
Gene Length | 1689 bp |
Protein Length | 562 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 643561703 |
Product | transcriptional regulator, PucR family |
Protein accession | YP_002458283 |
Protein GI | 219667848 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism [T] Signal transduction mechanisms |
COG ID | [COG2508] Regulator of polyketide synthase expression |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 50 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATTACAA TTCAAGATGT CCTTAATGCT GATGTTTTTC AAAACTATAA TGTTCTGGCC GGTGAAAACG GTCTCTTGCG GGAGGTCACA ACGATCACCA TCGCCGAAGT TCCGGATGCG GCCAAATGGT TAAGAGGAGG TGAACTTGTC TGTTCAACAG CCTTCTTTAT CAGCAACACG GGCTTAGAAC AAAGTGAATG GGTTGAAAGT CTAATCATCA ATGGCGCATC CGCTTTAGCC ATTAAAACCA GCCGCTTCCT TGGCGTACTG CCCAAAAGTA TCATTGAATG CGCCAATAAC CATAACTTTC CGATCATTGA ACTGGATCAT GAAGTTACAT GGCCGGCAAT CATTGAATCG TTTATGGATT ATGTAACAAA TCAACGGATA AAAATAATGC AGCTTATTGA AGACGTCCAA AGGGATTTAA TCAATCTTGT TTTGGAAAAC AACACCATAC AGACCCTTGT GAATAAAATC TCCGAATTAG TAGGGAATAC CATCATCATC GAGGATGCCA AACTCAACGT GATTGCCGTG AGCAATGTTG AAGGAGATAT CCAGTCTAAC CTCGACTCCC CTGTTTTTAA GGCAAGGATT AACGAACATT TCAGGCAAAA CGTCTTGAAA TCCAACTTTT ATAAAGCCGT CAAAATGGGC GAAAAAAAAG AACATCTTGA AATCAATCTC ACCATACCTC ATTCAGAAAA AATAAGAAAC TACATGTTTC CCATCTTTTC CAATAAAACA ATTTACGGTT TTATTTCCTT GTTAGAGAGC CAGCAAATTT ACTCATCCAC CGATCTGATG GTATTAAAAA ACTCATCAAC TGCCATCGCC CTCCAATTAA TGAAGCAGTA CCTGAACCAG CAGACATACA GAAAAAAGAA CCTGGCCCTT ATTGAAGATA TCATTCATGG ACGGATTCAT ACCCAAATTG TCTTTGAATA TGATTTTCTT AACATAAATT TAGCTAACCC TATGGTCGCT GTCCTCATGG ACTATGCAGA ACCTAATCTT GAAAACAATT ATTTTTGGGA ACGCTCTGAA GATCTCATCA CCATGACGAT CAGAAAACAT CTCTATAAAC ACTTTAATCA AGTGATTATC GGCAATAATG GCTCATTATT TACTTTACTG GTCTCCTTTC AGCCGAATCA GATTGAGAAA GTAAATTCCC TGGTTAAAGA AGCTGTAGAA CATGCCTTGG CAGAACTAGC GAAGCAATTT GGCGAGGATA AATTCAGCAT CGGGATTGGC GGCGCTTATC CTCAGCCGGA ACTGGTGGAA AAAAGCTTTA AAGAAGCCAA AACCGCTTTA TCTGTAGCCA AGAAATGTAA GATCAGGCGG GGTAATGTGC TTCTTTTTGA AGAAATAGGT ATTCATCGCA TTATTTTTAT GGTTCAGGAT ACCGCCAAAA TAAGAGAGTT TTGTGACGAT CTCCTCCTCG AACTAAAAAA ATACGACGAA AAAAACAGCG ATGTTCTCTT GGAAACCCTT CACGAATTCC TCTTGTGCGA TTGCGTAGTG AAAGAGACAG CCAAGAAAAT GTTCGTCCAT CCCAACACGG TAACCTATCG CATCAAGAAA ATAAAACAAC TCCTTAAACA TGACTTAGCT CTCCCGGAAT TTAAAATGGC GTATTTATTC GCTTTAGAAG CCAATGATTT CCTGAAGGAA TTATTTTAA
|
Protein sequence | MITIQDVLNA DVFQNYNVLA GENGLLREVT TITIAEVPDA AKWLRGGELV CSTAFFISNT GLEQSEWVES LIINGASALA IKTSRFLGVL PKSIIECANN HNFPIIELDH EVTWPAIIES FMDYVTNQRI KIMQLIEDVQ RDLINLVLEN NTIQTLVNKI SELVGNTIII EDAKLNVIAV SNVEGDIQSN LDSPVFKARI NEHFRQNVLK SNFYKAVKMG EKKEHLEINL TIPHSEKIRN YMFPIFSNKT IYGFISLLES QQIYSSTDLM VLKNSSTAIA LQLMKQYLNQ QTYRKKNLAL IEDIIHGRIH TQIVFEYDFL NINLANPMVA VLMDYAEPNL ENNYFWERSE DLITMTIRKH LYKHFNQVII GNNGSLFTLL VSFQPNQIEK VNSLVKEAVE HALAELAKQF GEDKFSIGIG GAYPQPELVE KSFKEAKTAL SVAKKCKIRR GNVLLFEEIG IHRIIFMVQD TAKIREFCDD LLLELKKYDE KNSDVLLETL HEFLLCDCVV KETAKKMFVH PNTVTYRIKK IKQLLKHDLA LPEFKMAYLF ALEANDFLKE LF
|
| |