Gene Dhaf_1644 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_1644 
Symbol 
ID7258613 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand+ 
Start bp1757124 
End bp1757588 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content39% 
IMG OID643561546 
ProductCupin 2 conserved barrel domain protein 
Protein accessionYP_002458126 
Protein GI219667691 
COG category[S] Function unknown 
COG ID[COG3837] Uncharacterized conserved protein, contains double-stranded beta-helix domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value0.522674 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGAGAA TATTAAACAT TGATAACATG CCCAGGGAGC ATATCGATGA TCCGGATTTT 
CAATCAAAAA TGCAAACCTT ATTAATAGGT AACGCTTTGG GATGTGAAAA AATCTATGTC 
AACATAGATT ATGTAAAACC AGGCGGCAAG AGCGTAAAAT ACCATTCCCA TTCGAAGCAA 
GAGGAGTTTT TTCTCATCAT GCAGGGGAGT GGTCTATTGA GGATGAATGG TGAAGAGGTA 
TCCATTAAAA CGGGTGATGT CATTTCCAAA CCTGCCGGTC AGGAGATCGC CCATCAATTC 
ATTAACAATG GTTCGGAGAT CCTGCAGATA CTTGATGCAG GTACTCGTGA AAAGGATGAT 
ATTGCGACAT ATCCTGATGA AAACGTAGTC TTTATAAGGA ACAAAGGTTT GGTTTTTGAT 
ATTAAAGATT GTATGAAAGG CTGGACCTCC GATCCGAATT CATAA
 
Protein sequence
MKRILNIDNM PREHIDDPDF QSKMQTLLIG NALGCEKIYV NIDYVKPGGK SVKYHSHSKQ 
EEFFLIMQGS GLLRMNGEEV SIKTGDVISK PAGQEIAHQF INNGSEILQI LDAGTREKDD 
IATYPDENVV FIRNKGLVFD IKDCMKGWTS DPNS