Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dhaf_1613 |
Symbol | |
ID | 7258582 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfitobacterium hafniense DCB-2 |
Kingdom | Bacteria |
Replicon accession | NC_011830 |
Strand | + |
Start bp | 1720920 |
End bp | 1722704 |
Gene Length | 1785 bp |
Protein Length | 594 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 643561517 |
Product | histidine kinase |
Protein accession | YP_002458097 |
Protein GI | 219667662 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.000260533 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAAGTTTC ATCAGCAATT AACCTTGCTT TTTGCGATCT TTTCATTAGG GTTGGTTATC TGTGGGTATA GGGTGCAAGA TGTGGGAATC GCCGGTGTAT TTTCTTTGCC TATACAGGTA AGGGCTGTTT TGGCCGTAGA ATCTGTGCTT GACATTGCCC AAAAGAATAA AATGCTGCCT GCGGTGTCTA TTGCAGGCAT GGGTATTTTT TTAGGTATAT CCAGGTATCG TTTCTTGCCA TGGCTGCCCC TGGCAAGAGC GGCAGCCATC GATGCGATTC AGGAAGGGAT GATCATCGTC GACGAACAGG GCGGAGTCGT TGATCATAAT GTTGCCGTAG ACAGGTTTAT CTACGACATT ATCGGGGTGA AGCGCAATGT CATCGGCAAG AATATTGAGT CGGTGCTCTC TGCCTGGCCC CAATGGCAAT CGGCCTGTAA GAATGGGCAT GAAGATGAGT TTGAGATCGA TGTTTCAGCT TGGGGAAAGG CCAGATTCTT CCGGGTAAAA GTGTATCCTC TTCAAGAATA TAATTTCCGG AAAAGGGGAA CGGTTTCGGT GCTTACGGAT ATTACGGAGG ACAGAATCCG GGGACAGAAG ACCTCGGATT CAGAATGCAG CGGAGAGCTG GTTCAAAAAG AGTTAACCCT GCTGAAACGG CAAATGGAGA TGGTTTTCAG CACCATATCG GACCGGGCGT TGTTATCCAT TGTGGATCGC AACGGTAATT ACTTGTTTTA TACCGAGGCC GTCAAAACCC AATTTGTCGA AGCTGCCGCC GATCTTACGA TTGGCTCGGC CTTCCGCAAA GGATTGTATT TTTATGCCGG CGGAACAGAA ATGGACTATT GTGATATCCC GGAGATCAAA GTGCTCAGTG GAGAAAAAGT ATCTCAATAT CACTTTATGA TGAAGGGGAT AACCGGTGAG ACCCATTTGC TGTTTAACGG AACGCCTATT TATGATGAAG AAGGAAATGT GACCTATGCT GTATTCTTTA CCCAGGACAT AACGGATCAA ATTCTTCACA AAAGACAGGC TCAGTTGACG CAGAAGCTGA CTGAGCTCAA TATGACAAAA GATCAGCTCA TTCAGGCAAT TACCCATGAT ATCCGCAACC CTATCGCAAC CCTGGTCAGT CTGATGGAAC TGCTGGAGGG AAAGGAACGT GACCCAGTCT ATCATGACCC AGACTATCAC AACCTTTTAA CGACAGTGTC AGATCAGGTC AAATATACCT ATGCTATGAT GGAAAACGTC TTGAAGTGGT TTCAAAAACA GAAAGAGAAA GTAAGTCTAA ACCCTTCCCA AATCAACTTG TATCTAAACA CTCAAAAAAC CCTCAGGATT TATGCCAGGC AAGCGGAAGG GAAAGGGATA GAGGTCAAAA ACAGGATCAC AGCCAATCTG CATGTCTATG CAGACAGGGA GTTAGTGGAA TTTGTTCTGC GCAATCTCCT GGACAACGCC ATAAAATTTA CGGCCAAAGG CGGAACAATC GCCATTCAGG CACACTCATC CTCCACCAAC GTGATTGTTT CAGTTACGGA TACCGGAATC GGGATGGACC CGGCGAGGTT AAGAACCCTG TTCGAGGATG CCACTCCAGG GACCCGGGGA ACTGAAGGAG AAAAGGGCTT AGGGCTGGGG CTTAGGCTCT GTAAAGAATT CCTGCATAGT CACGGCGGGG AGATATGGGT GGAAAGTGAA CTGGGAAAAG GAAGCACCTT CAGTTTTTCT CTCTCAACAT CCGGTAAATC AATTTTTGCA GGGGGAGAAG CATGA
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Protein sequence | MKFHQQLTLL FAIFSLGLVI CGYRVQDVGI AGVFSLPIQV RAVLAVESVL DIAQKNKMLP AVSIAGMGIF LGISRYRFLP WLPLARAAAI DAIQEGMIIV DEQGGVVDHN VAVDRFIYDI IGVKRNVIGK NIESVLSAWP QWQSACKNGH EDEFEIDVSA WGKARFFRVK VYPLQEYNFR KRGTVSVLTD ITEDRIRGQK TSDSECSGEL VQKELTLLKR QMEMVFSTIS DRALLSIVDR NGNYLFYTEA VKTQFVEAAA DLTIGSAFRK GLYFYAGGTE MDYCDIPEIK VLSGEKVSQY HFMMKGITGE THLLFNGTPI YDEEGNVTYA VFFTQDITDQ ILHKRQAQLT QKLTELNMTK DQLIQAITHD IRNPIATLVS LMELLEGKER DPVYHDPDYH NLLTTVSDQV KYTYAMMENV LKWFQKQKEK VSLNPSQINL YLNTQKTLRI YARQAEGKGI EVKNRITANL HVYADRELVE FVLRNLLDNA IKFTAKGGTI AIQAHSSSTN VIVSVTDTGI GMDPARLRTL FEDATPGTRG TEGEKGLGLG LRLCKEFLHS HGGEIWVESE LGKGSTFSFS LSTSGKSIFA GGEA
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