Gene Dhaf_1565 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_1565 
Symbol 
ID7258534 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp1669716 
End bp1670876 
Gene Length1161 bp 
Protein Length386 aa 
Translation table11 
GC content52% 
IMG OID643561471 
Productamidohydrolase 
Protein accessionYP_002458051 
Protein GI219667616 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1228] Imidazolonepropionase and related amidohydrolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0000482588 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTATTAA TTAAAAATGG AACGCTGCTT ACGATGACAG GTGAACCGAT TGAGAATGGC 
CAACTGCTCG TGGATAAGGG CAGAATCATT GCCGTGGGCA AGGATTTGAG CATTCCCGAA
CATTGTCCGA CCCTTGATGC TGAAGGCGGT TTTATCATGC CTGGTATGAT TGACGCTCAC
TGCCATGCAG GTATGTGGGA GGACGGGCTG GATTTTGAGG GAGCGGACGG CAATGAAGGT
ACTGACCCGG CGACACCCCA CCTTAGGGCC ATCGATGCTA TTAATCCGAG GGACAGAGCT
TTGACGGAAG CCTATGAACA TGGCGTGACC TGCATCTGCA CCGGTCCCGG CAGTGCCAAT
GTGATAGGTG GGCAATTTGC CACGATTAAA ACCAAAGGGA CAAGAATCGA TAAGATGATT
CTCCAGGAAA CGGCGGCGAT GAAGGTTGCT TTCGGTGAAA ATCCGAAGAA AAGATACAGT
GCCAAGCAAC AAAGCCCTTC GACAAGAATG GCCACCGCAG CGATCTGGAG AGAGTATCTG
TTTAAAACCA AAAATTATCT GGAGAATAAA GAGAAAGGTT CAGGGTTTGA CCTGAAGCTG
GAAAGCTTGA TCCCGGTGGT GAAAGGTGAG CTGAATGTCA AAGCTCATGT GCACAGAGCC
GATGATATTT TCACGGCAAT TCGCATTGCC AAAGAGTTTG GCCTTAAGAT GACCCTGGAG
CACTGCACTG AAGGGCATTT AATCGCTGAT GAGCTGGCGG AAGAAGGCTT TTCCGTCATC
GCAGGGCCCT TCATCGGCCC CAGGGGAAAA GTGGAGTTAA AAGAACTGAC CTTTGCTACC
CCGGCGATCC TGCATAAAGC CGGGCTGAAA ATAGCCTTGA TGACCGACCA TCCGGTTGTT
CCCGTACATT ATCTGCCGGT GTGCGCGGCC TTGGCGGTCA AAGCGGGACT GGCTGAAGAG
ACGGCCCTTA AGGCCATAAC CCTGAATCCT GCTGAAATCC TGGGGATTTC GGAGCGGGTA
GGTTCCCTGG AGGCGGGTAA AGACGCAGAT ATTGCGGTCT TTGACCGGCA TCCCTTGGAT
GTTCAGGCGC AAACCACCTG GGTGCTGATC GATGGCGAGG TTGTCTTTAA GCGGGGATAC
TTTGGCGATA GTCAGCGATA A
 
Protein sequence
MLLIKNGTLL TMTGEPIENG QLLVDKGRII AVGKDLSIPE HCPTLDAEGG FIMPGMIDAH 
CHAGMWEDGL DFEGADGNEG TDPATPHLRA IDAINPRDRA LTEAYEHGVT CICTGPGSAN
VIGGQFATIK TKGTRIDKMI LQETAAMKVA FGENPKKRYS AKQQSPSTRM ATAAIWREYL
FKTKNYLENK EKGSGFDLKL ESLIPVVKGE LNVKAHVHRA DDIFTAIRIA KEFGLKMTLE
HCTEGHLIAD ELAEEGFSVI AGPFIGPRGK VELKELTFAT PAILHKAGLK IALMTDHPVV
PVHYLPVCAA LAVKAGLAEE TALKAITLNP AEILGISERV GSLEAGKDAD IAVFDRHPLD
VQAQTTWVLI DGEVVFKRGY FGDSQR