Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dhaf_1564 |
Symbol | |
ID | 7258533 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfitobacterium hafniense DCB-2 |
Kingdom | Bacteria |
Replicon accession | NC_011830 |
Strand | + |
Start bp | 1668795 |
End bp | 1669511 |
Gene Length | 717 bp |
Protein Length | 238 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 643561470 |
Product | transcriptional regulator, GntR family |
Protein accession | YP_002458050 |
Protein GI | 219667615 |
COG category | [K] Transcription |
COG ID | [COG1802] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0000000123193 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTGAATA ATGCTTATGA TCGATTAAAT CATATGATCA CCTATTCAAA AGCAAATCTA AGTGAGACCG TGGTCTCCTA TGTGAAGAAT AAGATTCTCA CCGGGGAATT GAAGAGCGGG GATCGGCTGG TTGAAACGGA TATATCAGAA GAGCTGGGGA TAAGCAGAGC CCCTATACGC GAGGCCTTAA GAGAGTTGAA TATGCGGGGA ATCCTGATAT TTTTGCCCAA GAAGGGCAGT CAGGTGCTTA ATTTAGGTTA TAAAGACATT GAAGAAATCC TGTCCATAAG AATTCCGCTG GAGATGCAGG TGCTGACCCT TATTTTTAAA AAATCCCTTT TACAGGAACA GGAATTAGAT TATCTGGAGA AGCTGAATCA GGAGATGATC AGGGCAGACA AGGAAACGGC CATGGATGTC AGGGAGAAAA ACTATATTTT TAATACCTGT GACTTGGCTT TTCATGAATT TTTCTGGAAA CGATCAGAAA GCCTGCGCAG GGTGGAGATT TTAGAAAACC AATACTTCCA ATTGCTGGCG GCGATGAACA GGGATATATC AACATTAGGC TCAGTTATGG AAAAACATGA TGAACATAAA AGGATCATCG AGGCCTGCCG TACAGGGGTG CTTGATCAGG TGTTAGCCGC CTTTCAGGCA CATATGGCTC CGTATCTAAA AGCGATTATA AAACTTGAAA ACCAGACCGG CAAGTAA
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Protein sequence | MLNNAYDRLN HMITYSKANL SETVVSYVKN KILTGELKSG DRLVETDISE ELGISRAPIR EALRELNMRG ILIFLPKKGS QVLNLGYKDI EEILSIRIPL EMQVLTLIFK KSLLQEQELD YLEKLNQEMI RADKETAMDV REKNYIFNTC DLAFHEFFWK RSESLRRVEI LENQYFQLLA AMNRDISTLG SVMEKHDEHK RIIEACRTGV LDQVLAAFQA HMAPYLKAII KLENQTGK
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