Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dhaf_1370 |
Symbol | |
ID | 7258340 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfitobacterium hafniense DCB-2 |
Kingdom | Bacteria |
Replicon accession | NC_011830 |
Strand | + |
Start bp | 1477433 |
End bp | 1478131 |
Gene Length | 699 bp |
Protein Length | 232 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 643561282 |
Product | ABC transporter related |
Protein accession | YP_002457862 |
Protein GI | 219667427 |
COG category | [V] Defense mechanisms |
COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.000531133 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTTTAA TCAAGGTCGA TCATGTAGCA AAAATCTATC AAGGCGGCGA GGGAACAGTC TATGCCCTGA AAGATACGAA TCTCCAGGTT CTTCAAGGTC AGTTTCTGGC TTTGCTGGGA CCTTCCGGCT CAGGGAAGAG CACCCTGCTC AGCATCCTCG GTGCCTTGAA TCCGCCCACA GAGGGTAAGG TCTTCATCGA TGATATTGAT ATCTATGGGC TGGATGAAGA GCGCAGAGCT GATTTCCGCC ACGAGTATAT TGGCTTTGTC TTTCAGCAAT ATCAGTTGAT ACCCTATCTC ACCGCCCTGG AAAATGTGAT GCTCCCTTTA GCGATCACCC GGCACTCTGA TCGAACTCAG CGTGAGATGG CTCAAAAAGT TCTGGAAAAG GTGGGGCTGG GCAGTAAGTC CCTGCGCCTG CCTAACCAGC TTTCCGGTGG CGAGCAAAAC CGGGTGGCCA TTGCCCGGGC CATCGTCAAT AATCCAGTGA TTCTGTTCGC CGATGAACCA ACAGGAAGCC TTGACACCAA GACGGCCAAG GAAATTCTGG AACTCTTCCA AGCCTTGAAT AAAGAGGGGC AGACGATCAT TATGGTGACC CATAATCTGG AGAATCTTGC CTATGTCTCC CATGCGGTGC AGATCCGGGA TGGAATTATT GAAAAAGCTC CTCAGCCTGT GGTCGGTGGT GTGATATGA
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Protein sequence | MSLIKVDHVA KIYQGGEGTV YALKDTNLQV LQGQFLALLG PSGSGKSTLL SILGALNPPT EGKVFIDDID IYGLDEERRA DFRHEYIGFV FQQYQLIPYL TALENVMLPL AITRHSDRTQ REMAQKVLEK VGLGSKSLRL PNQLSGGEQN RVAIARAIVN NPVILFADEP TGSLDTKTAK EILELFQALN KEGQTIIMVT HNLENLAYVS HAVQIRDGII EKAPQPVVGG VI
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