Gene Dhaf_1228 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_1228 
Symbol 
ID7258198 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp1321043 
End bp1323574 
Gene Length2532 bp 
Protein Length843 aa 
Translation table11 
GC content48% 
IMG OID643561141 
Productmolybdopterin oxidoreductase 
Protein accessionYP_002457721 
Protein GI219667286 
COG category[C] Energy production and conversion 
COG ID[COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATTA CACGCAGAAG ATTTCTGCAA GCTTCGGCAG CGACCGGGCT CTTAGTTGCT 
GGATCTACAG GTTTTCCGGC TCTTCAAGCT CTCGCTCAAG GCGAAAATAC CGCCCCTAGT
GCAGAAGGAA AATGGATGAG CACGCTCTGT CAAGGATGTA CCACCTGGTG TGCCATTCAA
GCCTATGTCG TGGATGGCCG AGTGATTAAA GTCAGAGGAA ATCCGAACAG TAAAGCCAGT
CACGGCAAAA TCTGTCCACG TCCTCATCTA GCCATTCAAC AGCTCTATGA CCCAGACCGA
GTTAAAGTTC CAATGAAACG CACTAACCCC GTGAAAGGGC GTAATGAAGA TCCCAAATTC
GTCCCTATCA CTTGGGAGGA AGCTATTGAT ACTATCGCCG ATAAGATGAT GGAACTTCGC
AAAAATAATG AGCCTGAGAA ATATATCTTC TTCCGTGGCC GCTATTCCGG AACAACGGAT
ATCCTCTACG ATGCAACCAC CAAAGTTTTT GGCTCTCCCA ATAACATTTC TCACAGCTCC
ATCTGTGCAG AAGCCGAAAA ATTCGGCCCC TATTATACGG AAGCCTACTG GGATTATCGG
GATTACGACT TAGCTGAGAC TCGATATATC CTCAACTGGG GAGCTGACCC TGTAGCCTCC
AATCGCCAAG TCCCTCATGT TATGAATATA TGGGGTAATG TCGCAGACCA AGCAACGATT
GTTACTATCG ACCCCCGTCT TTCCGCATCC GCTGCCAAAT CTCAAGAATG GATGCCTGTT
ATTCCAGGAG AAGATGGAGC TCTGGCTGTC GCTATTGCCC ATGTCATCCT CACGGATGGG
TTATGGAATA AAGACTTTGT GGGTGATTTC AATGATGGAG TTAATCTCTT TAAAAAAGGA
GCAATAGTTC CTGAAGAATC CTTTACTGAA AAATATACCT CTGGCATAGT CAAGTGGTGG
AATCTAGAAC TGAAGGATCG TACTCCGGAA TGGGCTGCCG AACGGGCAGG TATACCTGCA
GATCAGATTA TCCGTGTTGC CCGCGGCTTT GCCAAAGCAG CTCCTCGATC TATCTCCTGG
TTGTCCCCTG GTTCTTCCAT GCAAGTCCGT GGAGCCTATA CCACCATGGC CGCTCATGCC
CTCAATGGTT TGGTAGGCTC AGTCGAGAAT ATTGGAGGTA CTTTGAGAGG CTCGAGTGTA
CCCACCGGTA AGCTCCCCAG CTATGAAGCT TATCAGGATG ATGTCTCCAA AAAGGGAACC
AAAGCCAAAA AAATCGATCA ACGAGGCAAT AAGGAATTCC CTGCCTTGAA AGACGGAAAA
TCCGGGGGTG GCGTACTCAC AAATCGTGTG GCTGACGCAA TGTTAGAAAA AAACCCGTAC
GAGATTAAAA TGGCAATCGC CGATTGGTGT AACCTCCCCT TCTCTTGTAC CGGCGCCCAA
CGCTGGGAAA AAGCCCTGGA GCAGCTTCCC TTCTTGGCTC ATATTACAAC CAACCCCTCT
GAGATGACTC AGTATGCTGA TATCGTCCTG CCTGCACCCA TGCATGTCTT TGAGAAATGG
TCCTTCAACA AGAGCAAAGC CAATAAATAT GGTTTTGCCT CTATCCAACA ACCTGTGGTA
GAGCCCCTTT GGGACGTAGT AAACGATGAA ACCGGTGTTT CCTGGCTTCT TGCTGAATCT
TTAGCCAAAA AAGGCTTCCC CAATCTTTTG GACTATTTTA AAAACGAAGT CAAAGACCCC
GAAACCGGTA AAACTCCGAG CTCCCACGAG GAATTCACCA TGGCTTGCCT TAAAATGTTA
ACGCATACCC TCTGGGATCC CAGTGCCGTG AAAAAAGGGG ATGTTCTTAA TGGCTGGCAG
GATTTTGTAG ATAAGGGAGT ATGGAACACT GTCGAACCTG CTTATTTTAA AAACTGGGAT
AAATTCGGTA CAAAAACCAC CAAATTTGAA TTCTATAGCG AAACCTTAAA AGCCGCCCTC
GAAGGTCATG CTGAAAAGCA TAAAACGACG GTTGATGATA TTATGCAGGC AACCAAATAT
TTAGCCAAGG GAGAACAAGC CTTTGTTCCT CACTACGAAG AGCCTTTCCG TCATGGTGAT
GCTGCGGAAT ACCCCTTCAT CTTCTTTGAG CATCGTTCAA GACTGAATCG GGAGGGTCGC
TCGGCCAATA CTCTTTGGTA TCAAGAATTT AAGGATGTAG ACCCCGGTGA TGAGGCTTGG
GATGATGTAG CTAAAATCAA CCCAGTGGAT GGGGCAAGTC TTGGTATCCA ATCCGGAGAT
ACCATCCGTA TTACCTCTCC ACAAGGGAGC ATCACCTGTA CGGCTAAGCT CTGGGAAGGC
GTTCGCCCTG GAACAGTGGG TAAATGTTAT GGCCAAGGGC ACTGGGCCTA TGGTAAGATT
GCCTCTTTGG AGTATGGCAA AACACCGCGC GGAGGAAATA ACAACGAAAT TCTTCCTTCA
GACTTCGAGC GCTTGAGTGG AAGTACTGCC CGTCACGGTG GAGTAACCCG GATCAAAATC
GAAAAAGTTT AA
 
Protein sequence
MKITRRRFLQ ASAATGLLVA GSTGFPALQA LAQGENTAPS AEGKWMSTLC QGCTTWCAIQ 
AYVVDGRVIK VRGNPNSKAS HGKICPRPHL AIQQLYDPDR VKVPMKRTNP VKGRNEDPKF
VPITWEEAID TIADKMMELR KNNEPEKYIF FRGRYSGTTD ILYDATTKVF GSPNNISHSS
ICAEAEKFGP YYTEAYWDYR DYDLAETRYI LNWGADPVAS NRQVPHVMNI WGNVADQATI
VTIDPRLSAS AAKSQEWMPV IPGEDGALAV AIAHVILTDG LWNKDFVGDF NDGVNLFKKG
AIVPEESFTE KYTSGIVKWW NLELKDRTPE WAAERAGIPA DQIIRVARGF AKAAPRSISW
LSPGSSMQVR GAYTTMAAHA LNGLVGSVEN IGGTLRGSSV PTGKLPSYEA YQDDVSKKGT
KAKKIDQRGN KEFPALKDGK SGGGVLTNRV ADAMLEKNPY EIKMAIADWC NLPFSCTGAQ
RWEKALEQLP FLAHITTNPS EMTQYADIVL PAPMHVFEKW SFNKSKANKY GFASIQQPVV
EPLWDVVNDE TGVSWLLAES LAKKGFPNLL DYFKNEVKDP ETGKTPSSHE EFTMACLKML
THTLWDPSAV KKGDVLNGWQ DFVDKGVWNT VEPAYFKNWD KFGTKTTKFE FYSETLKAAL
EGHAEKHKTT VDDIMQATKY LAKGEQAFVP HYEEPFRHGD AAEYPFIFFE HRSRLNREGR
SANTLWYQEF KDVDPGDEAW DDVAKINPVD GASLGIQSGD TIRITSPQGS ITCTAKLWEG
VRPGTVGKCY GQGHWAYGKI ASLEYGKTPR GGNNNEILPS DFERLSGSTA RHGGVTRIKI
EKV