Gene Dhaf_1154 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_1154 
Symbol 
ID7258124 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp1247255 
End bp1248508 
Gene Length1254 bp 
Protein Length417 aa 
Translation table11 
GC content52% 
IMG OID643561069 
ProductDNA-directed DNA polymerase 
Protein accessionYP_002457649 
Protein GI219667214 
COG category[L] Replication, recombination and repair 
COG ID[COG0389] Nucleotidyltransferase/DNA polymerase involved in DNA repair 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000000057173 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAGCAAAT CGATCATTTT TCATATTGAT GTTAACTCGG CCTACCTTTC CTGGGAAGCC 
GTCTATCGCC TTCAGCAGGG AGATCCTCTG GATTTAAGGA CTATCCCTTC CGTGGTGGGC
GGCGATCCCT TGACCCGGCA CGGGATTGTT CTGGCCAAGT CGATCCCGGC TAAGGAATAT
GCTATTAAAA CCGGGGAGAC TTTATACTCC GCCCTCGCCA AATGTCCGGA CCTGATCATT
GCCAGGCCTA ATTATCTCCT CTTCCGTCAG TGCAGCGAGG CTCTAAGCCT TATTTTAAGA
GACTATTCCC CTCTAATCCA ACAGTTTTCC GTGGACGAAT ATTTTCTGGA CTTCACCGCC
ATGGACCTTC TCTTTGGGGA CCCTCTGGCT ACCGCTTATA AAATCAAGGA GCGAATCAGG
AACGAGCTGG GCTTTACCGT AAATATCGGT ATTTCCACCA ATAAACTGTT GGCAAAGATG
GCTTCCGAAC TCCAAAAACC CGACCAAGTC CATACCTTAT TCCCTGAAGA GATTGCTGAG
AAAATGTGGC CCTTACCCGT GGGGGAACTC TTCATGGTCG GAAGGGCAAC CACCCGCCAG
CTCCTCTCCC GCAATATCAA AACCATCGGA GAGCTGGCGC ACACCGACCC TCGCCTCTTG
AAAGGGATCA TGAAAAGTCA CGGCCTGCTG ATTTGGAATT ATGCTCACGG CATTGAAAAC
TCCCCCGTCC GCCCCGGCGG CCGGGTAGCG GTCAAAGGCA TGGGCAATTC CACCACCACA
TCCTTCGATG TAAAAAACCG CAGAGAGGCT CACCTGGTTC TTCTCTCCCT TGTGGAAACG
GTCAGCGCCC GCTTAAGGCA TGATCAATAC TTTGCCCGGC TGATATCCAT TTCCTTTCGA
ACCCATGAAT TCCTTTCCTA TTCCCATCAA CGCAAACTCT CCCACGCTAC AGACTGTACC
AATGAGCTAT GGGAGATTGC CTGCCAGCTC TTTGACGAAT TATGGAAAGG TCAGCCCCTG
AGACATCTGG GAGTCCGGGC CTCTGAGCTC TGTCAAAACG ATTTCCTGCA GTTTTCCTTT
TTCACTAAGG ATTACGAGCG GGATCGGAAA GTGGACCAGG CTGTCGATAT CATTCGCCAG
CGCTTTGGCT CTCAGGCTAT TATGCGCTCC TCTTATCTCC ACTCCGGCCT TAAATCCATG
ACTGGGGGAG TCATCGCTGA AGAGGAGTAT CCGGCCATGA CCAGCCTGCT TTAG
 
Protein sequence
MSKSIIFHID VNSAYLSWEA VYRLQQGDPL DLRTIPSVVG GDPLTRHGIV LAKSIPAKEY 
AIKTGETLYS ALAKCPDLII ARPNYLLFRQ CSEALSLILR DYSPLIQQFS VDEYFLDFTA
MDLLFGDPLA TAYKIKERIR NELGFTVNIG ISTNKLLAKM ASELQKPDQV HTLFPEEIAE
KMWPLPVGEL FMVGRATTRQ LLSRNIKTIG ELAHTDPRLL KGIMKSHGLL IWNYAHGIEN
SPVRPGGRVA VKGMGNSTTT SFDVKNRREA HLVLLSLVET VSARLRHDQY FARLISISFR
THEFLSYSHQ RKLSHATDCT NELWEIACQL FDELWKGQPL RHLGVRASEL CQNDFLQFSF
FTKDYERDRK VDQAVDIIRQ RFGSQAIMRS SYLHSGLKSM TGGVIAEEEY PAMTSLL