| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_0805 |
|---|
| Symbol | |
|---|
| ID | 7257772 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfitobacterium hafniense DCB-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011830 |
|---|
| Strand | - |
|---|
| Start bp | 893495 |
|---|
| End bp | 894892 |
|---|
| Gene Length | 1398 bp |
|---|
| Protein Length | 465 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 643560720 |
|---|
| Product | nickel-dependent hydrogenase large subunit |
|---|
| Protein accession | YP_002457304 |
|---|
| Protein GI | 219666869 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0374] Ni,Fe-hydrogenase I large subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 52 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGCTGGAAA AGAAAGTTAT CTTTCCATTT ACTCGCATTC ATAATCCAAT GTTAGTGGAA
GCTTATCTGG AAAACGGAGT TATACAAGAA GCTTTTATTT CGGATACCCT TTACCGAGGC
TTTGAGCAGA TTCTCGAAGG GCGCCCTGCT TTTGATATGC CTTATTACAC TCAGCGCATC
TGTGGCATAT GTTCCTCCGT TCATGCTGTA GCGGCAGCTT TTGCTGTAGA ACAAGCACTT
GGCATGACTG TTCCCTCCAA TGGATTGATC CAACGCAATC TTATTATGGG CAGTGATTTC
CTGCAGAATC ATATTCGGCA TTTCTATCTC ATGAGTATGC CGGATTATTT TAAAGGACCT
GACATTCCTC CTTTTACACC TCATTTAGAG GGCGATATCC GATTTAATAC TGAAGAAAAC
CAACGCATGA CGGAGCATTA TTTTCAAGCT GTGGAGATTT CCCGGGATGC TCATGCCGCC
TTCGGTGTAT TCGGAGGAAA GGCTCCCCAT GGGCACGGAA TTGTACCCGG TGGATGCACC
ATGCATGTGG ATGCCGATAA AATCAATCGC TATCGCGGCT ATTTGATCAA AATTCTCGAA
TTTATCAATA ATGTTATGAT ACCCGATATA GAGCTCCTGG TAAAACGCTA CCCGGAGTAT
GTCCACCTGG GAAAAGGCAA TGGTAGCTTT CTCTCAGTGG GAGGCTTCAC CCAACCGGAT
GGCGGTACCT TATTTCCTCA CGGGATTGTG CTCGAAGATA AACACCAGCC CTTTGATGAC
CGGTTAATCC TGGAGGAGGT GACAACATCC TGGTATAAAC CAACTCCCCC CGCTCACCCT
TGGCAGGGAA TAACCGAGCC GGACAAGAGT CAACCTCAAG GCTATACCTG GGTTAAGGCT
CCCCGCTACC AGGGGCATGC CCTGGAAGTA GGCCCCTTAG CCCGGGCCGT GATAGCCAAG
GAAAAAATTA TCGGCTATGG CACTCTTGGC CGTCATTGGT CTCGGGTCAT GGAAACCAAG
AAGATTGCCG AAGCGGCCAT GATCTGGCTG GAGCGCCTGG TTCCTGGAGC AGAGACTTTA
AATACCAAAG TCCAGCAAGA ATCAGGCATG GGTATAGGCT ATGTGGAGGC CATGCGAGGG
ACTTTAGGTC ATTGGGTAAA AATCGAAAAA GGACGGGTTA AGCATTATCA AATCATAACA
CCATCGACTT GGAACTTTAG TTCGCGGGAT GAAGCCGGTA ACTGCAGTGT AGGAGAATTA
TCCATTCGCG GCCTCACCAT CAAGCATCCG GAATTAAAAG AAGCCGGAAG AGTGATTCGC
TCCTTCGACC CTTGCTTTTC CTGCAGTGTG CATCTCATTG ACGGAGAACA ACTCCGCACT
TTAGATATCC GGGTCTGA
|
|---|
| Protein sequence | MLEKKVIFPF TRIHNPMLVE AYLENGVIQE AFISDTLYRG FEQILEGRPA FDMPYYTQRI
CGICSSVHAV AAAFAVEQAL GMTVPSNGLI QRNLIMGSDF LQNHIRHFYL MSMPDYFKGP
DIPPFTPHLE GDIRFNTEEN QRMTEHYFQA VEISRDAHAA FGVFGGKAPH GHGIVPGGCT
MHVDADKINR YRGYLIKILE FINNVMIPDI ELLVKRYPEY VHLGKGNGSF LSVGGFTQPD
GGTLFPHGIV LEDKHQPFDD RLILEEVTTS WYKPTPPAHP WQGITEPDKS QPQGYTWVKA
PRYQGHALEV GPLARAVIAK EKIIGYGTLG RHWSRVMETK KIAEAAMIWL ERLVPGAETL
NTKVQQESGM GIGYVEAMRG TLGHWVKIEK GRVKHYQIIT PSTWNFSSRD EAGNCSVGEL
SIRGLTIKHP ELKEAGRVIR SFDPCFSCSV HLIDGEQLRT LDIRV
|
|---|
| |