Gene Dhaf_0704 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_0704 
Symbol 
ID7257671 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp790514 
End bp791698 
Gene Length1185 bp 
Protein Length394 aa 
Translation table11 
GC content44% 
IMG OID643560620 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_002457204 
Protein GI219666769 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones54 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATGA AAAATTCCGG TTTTACATTG AAGTTGGCCA TCAGTTCTGT TTCATTACTG 
GTAATGACGT ACAGCTCGAT TTCGGTTATT ATGGCTGATT TGATCAAAGC GTTTCCCCAT
GTTGATCCTA CAGTTGTACA AAGCGTTCTT ACAATATCCG CGCTTGCCAT TGTGTTCGGT
ACTTTGCTGA CGGGCCTTAC AGCGGAAATA GTCGGCAAAC GAAAGCTGTT ATTATTGGGT
ATTGCCTTGT ATACATTAGG CGGGATAGGG CCGCTGTTCT TCAGCAGTTT TGCGTCTCTG
ATGGTTTCCA GGGCTGTTCT GGGTGCGGGA ATCGGTATAA TGAACCCCAT TGCTACGACA
CTGATTGGCG ACTTTTTTCA GGGTGGGGCA GACCGTGCGC AATTGGTTGG CTTTAAATCG
ACAGCCGGCG GTTTAGGTCA AACTATTTTT CCCATATTTA TGGGGATTCT AGCTGTTTCG
GGCTGGAGAA ACGTATTCTG GGTATATCTG TTCGGATTGC TTATTCTTGC GGTTGTATAT
TTCTATATTC CCGAGCCGCC TAAACTCCAA GTAAATGGCG CAAAAGCCAA AGTGAAGGAT
TTTTATAAAA TCAATTTCCC AGTCATCGCA ATTTGCCTGT TTGTATTTTT TGCCTTTGTC
GCACACATGG CAATCTTTAC AAATACAGCA ATTTTTATGG TCCAATCAGG TTTAGGCGAT
ACCTCCTCGG CGACCGTTGC TATTGCCGTA CTGTCCGCCG CTCATATGTT TATGTCACTT
ATCTTTAAAT ACTCCTTCCA GATATTTAAA AGATTTGTCG GCCCTATCGG TACAGTAATG
CTTGGTGCGG GCTTATTGAT TATGGCAAAC GCTCAGAGTA TGACCGCTGT CTCCATCGCC
ATGATCTGCA TGGGCATCGG GGCGGGCACT TATATTCCCT ATGCTTATGA CCTGATAACA
AATTTAGCAC CGAATACTTC CAGAAGTTTT AGCATCTCTT TGATGCTGAT CTGTTTAAAT
TTCGGAGGCT TCCTTTCTCC GTTCATTATG ACATTTAGCG CTTCCGCATT TGGAAACAAC
ACAAGCGGTT TTAAGATGTT AATAGCCGCT GTTATCTTCT TTGTGCTGAC GGCTTGCACC
CTGCTTTATG CAATAAGATC TCCTAAAGGG GCTGCCGAAA GATAG
 
Protein sequence
MKMKNSGFTL KLAISSVSLL VMTYSSISVI MADLIKAFPH VDPTVVQSVL TISALAIVFG 
TLLTGLTAEI VGKRKLLLLG IALYTLGGIG PLFFSSFASL MVSRAVLGAG IGIMNPIATT
LIGDFFQGGA DRAQLVGFKS TAGGLGQTIF PIFMGILAVS GWRNVFWVYL FGLLILAVVY
FYIPEPPKLQ VNGAKAKVKD FYKINFPVIA ICLFVFFAFV AHMAIFTNTA IFMVQSGLGD
TSSATVAIAV LSAAHMFMSL IFKYSFQIFK RFVGPIGTVM LGAGLLIMAN AQSMTAVSIA
MICMGIGAGT YIPYAYDLIT NLAPNTSRSF SISLMLICLN FGGFLSPFIM TFSASAFGNN
TSGFKMLIAA VIFFVLTACT LLYAIRSPKG AAER