| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_0567 |
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| Symbol | |
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| ID | 7257534 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfitobacterium hafniense DCB-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011830 |
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| Strand | - |
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| Start bp | 625624 |
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| End bp | 626466 |
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| Gene Length | 843 bp |
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| Protein Length | 280 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 643560485 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_002457069 |
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| Protein GI | 219666634 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000000000000656533 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATTACA ATTCCATTCC AACTGAGATT ATCGATACTA TCCTTGCGGA ATTAAAAATC
GGTTTAACTC TTGTCAACAA TACGGGAAAA ATTATTTATT TCAATCAGTT GGCCGGTGAA
TTGCTTGGCT GGGACAATAA GCTCCCCGAA AATACTATTC TCTCCTGTCA CAAAAAAGAA
AACCAGCCCA AAGTGATTGA GAAACTTAAT CAGCCTGCCG CTATGGAATG GCACAAAGTG
ATTAAAACTC AAAACAGGTT TATTGAGAAC GCCTATTCCC CGATCAACAT ACCGGATAAA
TTTATGGGGG CAATGATTCT TACCAAGGAT GTGACGGCGA GAGAAGAAAG TTTAGAAAAA
TTAAAGAAAA ATGCCGAAAC GGATGCCCTC ACAGGGCTAT ATAACCGCAA TCTCTTTCAT
ACGGTTATTC AGAGCTATAT TACGGAGTCC AAGCCTTACG GGCTGATTAT GCTTGACATT
AGCGGTTTGA AGTATATCAA TGACCATTTT GGCCATGAAG AAGGGGATCG AATCCTCAAG
GAAGCTGCTG AGGCTATTCG AAGCAGCATC AGAGATACTG ATTTCGCCTT CCGCTTTGGC
GGCGATGAGT TTCTGATTCT TACCTCTTAT CAGGAAGCCG TTCTCAAAAC CATCGCCAAC
AGAATAAGGA GCAAAAATAA GATTCCGACC GAGAATACTC CCGCGGTATT AAACTTAAGC
TTAGGTTATG CCACTTCTTT GGAAGAAAAG AATATGGAGG CTGTTTTGTC CTCAGCCGAC
CAACGAATGT ACCGGGACAA GCAGCTGTTT TATCTGGGTG ACGGAAAATA CTTTAAACAA
TAA
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| Protein sequence | MNYNSIPTEI IDTILAELKI GLTLVNNTGK IIYFNQLAGE LLGWDNKLPE NTILSCHKKE
NQPKVIEKLN QPAAMEWHKV IKTQNRFIEN AYSPINIPDK FMGAMILTKD VTAREESLEK
LKKNAETDAL TGLYNRNLFH TVIQSYITES KPYGLIMLDI SGLKYINDHF GHEEGDRILK
EAAEAIRSSI RDTDFAFRFG GDEFLILTSY QEAVLKTIAN RIRSKNKIPT ENTPAVLNLS
LGYATSLEEK NMEAVLSSAD QRMYRDKQLF YLGDGKYFKQ
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