Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dhaf_0498 |
Symbol | |
ID | 7257465 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfitobacterium hafniense DCB-2 |
Kingdom | Bacteria |
Replicon accession | NC_011830 |
Strand | + |
Start bp | 552410 |
End bp | 553618 |
Gene Length | 1209 bp |
Protein Length | 402 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 643560417 |
Product | major facilitator superfamily MFS_1 |
Protein accession | YP_002457001 |
Protein GI | 219666566 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00000000266788 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTAAAG AGAATAAGGC TCAGGTTGTC ATGATCGCCG CAATTACTGC TTTATGCATT TTGGGAGATT CAATGCTCTA TGTTGTGCTG CCCACCCACT GGCAAGAGGC CGGGCTGACC TCCCTCTGGG AAGTTGGGGC ATTGCTTTCG ATAAACCGCT TTATCCGGGT ACCTCTGAAT CCGATTGTGA GCAGGCTTTA TAGAAAATTA AGCCATCGCA AGGGCATTAT TTTAGCAATC CTTCTCTCGG CCATGGCGAC AGCTTCTTAT GGGATCAGTG GCTTTTGGTT TTTATTATTG ATGCGGGCAA TCTGGGGAAT CGCCTGGACG TTTCTCAGGT TAGGAGCTTA TTTTTTTATC CTCGATATTT CAGCTGACGA AAATCGTGGG CATTATATGG GCATTTATAA CGGGATTTTC CGGTTGGGGA GTTTAGTCGG TATGCTTGCC GGAGGCATCA TTGCCGATAT CTTCGGCATG AAAGCGGTCT CGTTTGTGTT TGCCGGTATT ACTCTTTCAG CGCTTTTTCT GGTGTACTAT TCAGTCTATC CATCCTCGGG TTCAACAACC CCCCTGGCAA CGGCTGCTCC GCCGGCAACA TATCCGTTAA AGATCACTAA TGTATGGAAA GACTCCCAAA TAATCTGGAT GCTGCTCACC GGTTTTTTGG TGACAATGCT CTATCAGGGA GCATTTACTT CAACCCTTAG TCATCTGATC GATCTGCGGC AAACTCAGCA GATGGCTGCC CATGTCATGA TCGCATCGGC CTCCTTGGCG GGAATTATCC AGGCAATCCG CTGGGGTTGG GAGCCTTGGC TGGCGCCTTG GTTCGGTCGG AAATCCGATC ATTGGGGACG CAGGCCGGTC CTGATTATCG CTTTGCTGGC AGCATCTGTA TTATTTGCTT TAATCAATAC GGGAGTTCCG TTCGGGATAT GGATTGCCAT AATTTTTGGG GTTCAATTAA CGGCCACTGT TTTAACGACG GTTGTGGATG CGGTAGCGGG TGATGTGGCT TCGCAGACAA CGGTCAAAAC GTCCATAATG ACAGCTTATT CAATAGTCAC AGATTTAGGT TCGGCTGTAG GAGCCGTAAG CGTCTATCTG ATAGCTTCAG CAATAAATAT TGAGGTATAT TATTGGGGCG CAGCTTTGAT TCTGCTGCTG CTGGCCTTCA AATGGGCGGC GGCATTAAGA AAAGCCTGA
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Protein sequence | MAKENKAQVV MIAAITALCI LGDSMLYVVL PTHWQEAGLT SLWEVGALLS INRFIRVPLN PIVSRLYRKL SHRKGIILAI LLSAMATASY GISGFWFLLL MRAIWGIAWT FLRLGAYFFI LDISADENRG HYMGIYNGIF RLGSLVGMLA GGIIADIFGM KAVSFVFAGI TLSALFLVYY SVYPSSGSTT PLATAAPPAT YPLKITNVWK DSQIIWMLLT GFLVTMLYQG AFTSTLSHLI DLRQTQQMAA HVMIASASLA GIIQAIRWGW EPWLAPWFGR KSDHWGRRPV LIIALLAASV LFALINTGVP FGIWIAIIFG VQLTATVLTT VVDAVAGDVA SQTTVKTSIM TAYSIVTDLG SAVGAVSVYL IASAINIEVY YWGAALILLL LAFKWAAALR KA
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