Gene Dhaf_0343 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_0343 
Symbol 
ID7257308 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp380790 
End bp381911 
Gene Length1122 bp 
Protein Length373 aa 
Translation table11 
GC content47% 
IMG OID643560260 
Productperiplasmic binding protein 
Protein accessionYP_002456846 
Protein GI219666411 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAAAAAAT GGTTGCTATT TTTGATGATT CCGCTTCTTA TTCTGACAGG ATGCGCAAGT 
CAGGTATCTC AGAATCCCGG TCAGGAAGAC GGCGGTAAAG AGAATAGTGC AGAGAAAAGT
ACACAGGTGA TTGCCGATAT GATGGGAAGA GAAGTGGAGG TGCCGACAAA GATAAACTCC
ATCATCTGTA CCGGTGCCGG TGCTCTGCGG CTGATCGCTT ATGCCCAGGC CACGGATCTC
GTGATTGGCA TTGAAGATAC CGACAAGAGC GGAGTGATAG GGCGGCCTTA TAACTATGTT
TATCATGATC AGTTCAAAGA CCTCCCCAGT ATCGGCAAGG GCGGCGGCCG AGGCTATACC
GCCTATGAAG AGCAGATAAT CGCCCTGCAG CCGGATGTCA TTTTCTGTAG TTATACCAGT
GACGCTCTTG ACCAGCTTGC CGCCAAGACA GGTATTCCTG TAGTATCTAC CGCTATTCAG
GGCAATTTAT TTGAAGAAAA TACCGTTGAA TCCCTGAAAT TAATAGGTGA AATATTGGGG
AAAGAAGAAC GCTGTGCTGA GGTGATTGCT TATCTGGGCC AATATGAGGC CGACCTCAAT
AACCGTACTA AGGATATTCC GGAGGCAGAC AAACCGACGG TGTATGCCGG GGCTATATCC
AATCAGGGGG GCCGGGGATT TGCCGGAACC TACGGTGGCT TGGGCCCCCT TAAAGCGATT
AATGTCAGTG GTGTCATGGA TGAGGTAGGA AAGAAAGAAG GCTTTGAAGT GGATTGGGAA
CAGATTCAGG TCTGGGATCC TGATGTTATC TTCCTTGACC CCGGCAATAT AAGTCTGGTC
AATGAAGAAT ATGCAAAGAA GCCCGATTAT TTCAATTCTC TGCGCGCGGT GACAGAAGAA
AATGTTTACT CGATCATCAG CTTTAATAAT TATACGACCA ATATTGAAAC GGCAATTGCC
GATGCCTACT ATGCGGGTAA GGTACTGTTC CCCGAGAAGT TTGCCGACAT TGATATGGAG
GCTAAAGTGG ATGAGATCTA TAAAAAGTTC TTAGGAAAGG GGATCTATGC CGATATGAAG
GAGGCTGGAT TATCCTTTGG AAAGATTACA CTTGGTCAAT AA
 
Protein sequence
MKKWLLFLMI PLLILTGCAS QVSQNPGQED GGKENSAEKS TQVIADMMGR EVEVPTKINS 
IICTGAGALR LIAYAQATDL VIGIEDTDKS GVIGRPYNYV YHDQFKDLPS IGKGGGRGYT
AYEEQIIALQ PDVIFCSYTS DALDQLAAKT GIPVVSTAIQ GNLFEENTVE SLKLIGEILG
KEERCAEVIA YLGQYEADLN NRTKDIPEAD KPTVYAGAIS NQGGRGFAGT YGGLGPLKAI
NVSGVMDEVG KKEGFEVDWE QIQVWDPDVI FLDPGNISLV NEEYAKKPDY FNSLRAVTEE
NVYSIISFNN YTTNIETAIA DAYYAGKVLF PEKFADIDME AKVDEIYKKF LGKGIYADMK
EAGLSFGKIT LGQ