Gene Dhaf_0200 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_0200 
Symbol 
ID7257161 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp223613 
End bp224815 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content53% 
IMG OID643560114 
Productprotein of unknown function DUF214 
Protein accessionYP_002456704 
Protein GI219666269 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG4591] ABC-type transport system, involved in lipoprotein release, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones56 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTGCAA AACTAATTTG GCGGAATGCC AAAAGACGGC TCTGGCAGCA GGGGCTCACC 
CTGTTTGTCG TCGTAGCCTG CGCTGCCGCC CTGACAGCCG GGATACTGTT GGTCTGGGGC
ATTGAGAAAG GGGGCCAAAG TGCCGTCGAT AATCTGGGAG CGGATGTTAT GGCTATACCG
GCGGATGCCC ACCTTGAACC AGGTCAGGTG CTGTTTACCG GGGCTCCTGC CAATATCTAT
ATGAATTCAG AAGTATTGAA GGAGATTGAG AAGGTGCCCG GTGTGGAAGC CATATCGGCA
CAATTCTTCA GCCAGACGCT TAATCAGGGC TGTTGCAGCC TTCCGGAAGA ATACCGGCTG
GTTGGCTATG ATCCACAGAC GGACTTTCTG ATCAGGGACT TATTGGCGAA GGGAGTGGGC
AGGGATTTAA AGAACACGGA GGTTATTGTG GGCGGGAATG TGCCTGCTTT TCTAGGGGAC
CGGGTGGTGG TTTTAGCTGA ACCCTTTGAT GTTGCCGGTT ACCTGGAACC CATGGGAGGA
AGTATTGACG ACACGATCTT TGTGCCCATT GCAACGGCCC GGAGACTGGC CGGAAAAAGT
CCCTATTTAC AGGAATATTG GCAGGAGGCC GGGAGCCCGG AACAGTTGGT TTCGTCGGTA
TTGATTAAAA CAAAAGATGG GGCTGATCCG AATCAAGTTG CCAAAGCTAT CGATAGGATC
AGTGGAATTA AAAGCGTGGC AGCAGGGAAA TTATTTTCCG AACTTAAAGA AGAATTGCTC
GTGATTAAAG AAATTCTGCG TTTGCTGGTG GTCATTATTT GCGGCATTAC CATGGCCTCC
CTGGCGTCAC GCTATTCCTC CCTGGTACTG GAGAGACAGC AGGAATTGGC TCTGTTGCGG
GCACTGGGAA CGGAAAGAGG GAACCTATTT AAGCTGGTCA TGCTGGAAAC CCTTTGCAGC
GGACTGGCGG CTGCAGTCAT GGGATGCCTG GCTGGATATG GCTTGGTTCT TTATCTGGCA
AAGTCCCTGA GCAAGCACAG CTCCTTCCCC TTCATGCTGC CTGGGGCGGC TCAGCTTTGT
GCCGCTGGCT TGGGGATTAT CGCTTTTGTT CTTCTCATCT GCTGTTTAGC CGCCTTCTGG
CCGGCCAGAA GTTCGTCACG CTTGGATCCC GTAACCGCTC TAACTGAAGG AGAGCTGAGG
TAG
 
Protein sequence
MFAKLIWRNA KRRLWQQGLT LFVVVACAAA LTAGILLVWG IEKGGQSAVD NLGADVMAIP 
ADAHLEPGQV LFTGAPANIY MNSEVLKEIE KVPGVEAISA QFFSQTLNQG CCSLPEEYRL
VGYDPQTDFL IRDLLAKGVG RDLKNTEVIV GGNVPAFLGD RVVVLAEPFD VAGYLEPMGG
SIDDTIFVPI ATARRLAGKS PYLQEYWQEA GSPEQLVSSV LIKTKDGADP NQVAKAIDRI
SGIKSVAAGK LFSELKEELL VIKEILRLLV VIICGITMAS LASRYSSLVL ERQQELALLR
ALGTERGNLF KLVMLETLCS GLAAAVMGCL AGYGLVLYLA KSLSKHSSFP FMLPGAAQLC
AAGLGIIAFV LLICCLAAFW PARSSSRLDP VTALTEGELR