Gene Dhaf_0174 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_0174 
Symbol 
ID7257128 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand- 
Start bp191768 
End bp192328 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content33% 
IMG OID643560081 
Productintegrase family protein 
Protein accessionYP_002456678 
Protein GI219666243 
COG category[L] Replication, recombination and repair 
COG ID[COG4974] Site-specific recombinase XerD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.00273109 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGGTTG AACCAATTCG AGATAAAGCA CAAATACGAA CATTGTATAA CCATCTTAAT 
CAATCTCATC CTAAATATGC TATGATCTTT AAATTTGGAA TTAATACAGG ATTGCGGATC 
AGCGACATCA TCACACTTAA GGTTTCCGAT ATTTACGGTA GCAAGAAGCA GTTTAAAGAT 
TACTTGGTTT TAACAGAACA AAAAACTGGG AAATTAAAAA AAATTAAATT GAATGATACT 
TTGCGAAAAG CATTGAATAT TTATATCCAT AAGCAAAACT TGGAACTAAT GGACTATTTA 
TTTCCGAGTC AAAAAGGGGG CTATATAGGC AGAATTCAGA CATACCGGGT ATTAAAACAT 
TCCGCCCTTG CATTAGGCAT AGAGAATTTC GGAACACATA GTCTTAGAAA AACATGGGGT 
TATTGGACAT ATAAACTATC TCAGTATAAT ATAGGTCTAG TCATGGATAT TTTTAATCAT 
AGTTCACAGA GTGTTACTTT GCGTTATATT GGTATTAATC AAGACCAGAG AGATCAATTG 
TACGATATAG TTCAACTTTA A
 
Protein sequence
MTVEPIRDKA QIRTLYNHLN QSHPKYAMIF KFGINTGLRI SDIITLKVSD IYGSKKQFKD 
YLVLTEQKTG KLKKIKLNDT LRKALNIYIH KQNLELMDYL FPSQKGGYIG RIQTYRVLKH 
SALALGIENF GTHSLRKTWG YWTYKLSQYN IGLVMDIFNH SSQSVTLRYI GINQDQRDQL 
YDIVQL