Gene Dgeo_3088 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDgeo_3088 
Symbol 
ID5687565 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDeinococcus geothermalis DSM 11300 
KingdomBacteria 
Replicon accessionNC_009939 
Strand- 
Start bp176647 
End bp177738 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content65% 
IMG OID641262553 
Producttransposase IS4 family protein 
Protein accessionYP_001527827 
Protein GI158421600 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTGGAACC TCAAGCTTCG CGGGGAGCGC GCGTCCATTC TGGCAGATGC GCTCCTGTCT 
GTCCCCACCA GCCCTTACCA GAAGCGCAGC CTGGAGGCTG CGCTGGGCCT CTTCCTGGAC 
CTGAAGACGA AAACGGCGCT GCACCGCGCC CATACCGTCA GCGCCAGTGC CCTGAGTCGC 
CTGCTGAACG TGTATGAATG GGATACGGCG GCCTGCTGGG TGACCCTGGT CCAGGCGCAG 
TGGGACGCTC TGCTCCTGGC GGCACGGCGC AACCATCATC CTCGTTTGCG GCTGTGTGTG 
GACCTGACCA GCGTCCCGAA GACGGGACGC GAGCTGCCCT TCGTTCGCGT CTATCACGAG 
GTCTACGGCA TTCATCTGGT GGTGCTGTAC GCGGTGTACC GGGACTTGAA GTTCCCGGTG 
GGCTACCGGG TGTACCGGGG GAAGGGGTCC CCTTCCCCCG TCCGTCTCGC TTTGGAGCTG 
CTGGCGAGCG TGCCCGCCGA AGTGAGCCGT CGCTTTGACG TCTGGGTGCT GGCGGACAGC 
GGGTTCGAGT CAGCCGCGTT CCTTCAGGGC GTGCGGGACC TGGGCTTCGA GTTCGTGGTC 
GGGGTCCGCT CCACTCGGCG CACCGACCAT CCCGGTCGCG TCACCGTGGA GGACTGCGAA 
CACGGGAGCT GGGTGAATCT CGCCAACTGG CCCTGGGACA CCCTGACGCT GGCCCGTGTT 
GAGCGAGGGG AGCGCACCTT TTTCTCGGTG GCGTCGCAAC TGCTCCCGGG CGACCGTGTC 
GCCCGGGAGG GAGCACGGCG CTGGGCTATT GAGTCTTTTT TCAAGGAGGC CAAGCATGGC 
TTCGGGCTGA ACCGGTTTGC GTTGCGAACC GCGCAGGGAC TGGACCGCTG GGTGCTGCTG 
GTTTTCGCCG CCTTCACCTT GGCCATGCTC TGCCGAGCTG ACACCCTCTC GCTGGAACAA 
GCGGCGGAAG TTGCGGCTCG GGTGGCGCTG CCCCTGCTGG TCATTCAGCG ACTCGCTGTA 
CAAGTCTGGC GAGAGGAAGA ATTCCTGCGC CAGCACGGAT ATGCACTCAC CCTATCCAGG 
TGCAAGACTT GA
 
Protein sequence
MWNLKLRGER ASILADALLS VPTSPYQKRS LEAALGLFLD LKTKTALHRA HTVSASALSR 
LLNVYEWDTA ACWVTLVQAQ WDALLLAARR NHHPRLRLCV DLTSVPKTGR ELPFVRVYHE 
VYGIHLVVLY AVYRDLKFPV GYRVYRGKGS PSPVRLALEL LASVPAEVSR RFDVWVLADS 
GFESAAFLQG VRDLGFEFVV GVRSTRRTDH PGRVTVEDCE HGSWVNLANW PWDTLTLARV 
ERGERTFFSV ASQLLPGDRV AREGARRWAI ESFFKEAKHG FGLNRFALRT AQGLDRWVLL 
VFAAFTLAML CRADTLSLEQ AAEVAARVAL PLLVIQRLAV QVWREEEFLR QHGYALTLSR 
CKT