Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dgeo_2822 |
Symbol | |
ID | 4074051 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Deinococcus geothermalis DSM 11300 |
Kingdom | Bacteria |
Replicon accession | NC_008010 |
Strand | + |
Start bp | 205845 |
End bp | 206717 |
Gene Length | 873 bp |
Protein Length | 290 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641228658 |
Product | RpiR family transcriptional regulator |
Protein accession | YP_594325 |
Protein GI | 94972285 |
COG category | [K] Transcription |
COG ID | [COG1737] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGACTC CACCTGCCCA TCTTCCTCCA GTCCTGCGCC GCCTCCACCT CCTGCGTGAG GAACAGGGTG CTGCTACCGT GCGCGTCATC GATCAGATCC TGATGGATCC AGAGCGGTTT CTGTCGCTGA CCATCGCGGA ACTCAGCGAG GCAGCCGGCA CCAGTGACGC CACGGTCGTG CGGCTGGTGC AGCATCTGGG GTTCGGTGGG TATCAGGAGT TCAAGCTGCA GCTCTCGCGG GCACTGGCGG TCAGCCGAAA AGCCGACCTG ACCGTGGAGC CCCAGGACGC CTCAGTCACC ATCTTGCGCA AGATCTTCGA CTCGTCCAAT ACAGCATTGG ATGACACGCT AGAACACCTG AACCTGGAGG CCTTTAGCGC TGCCGTGCAG GCCATGACGC TCGCGCGGCA TATCGAACTG ATCGGGATGG GGGCCAGCGG TGTGGTGGCT TTGAGCGGTC AGTACCGGGG CCTGCGGCTG GGCTTATCCT GCCGGGCAAG CACCGATCCT GGCACTTTCC TCTCCACCTG CTCGCTGCTT GAACCAACCG ACGTGCTGAT CGCGGTGTCC TTTAGTGGCA CGCGGCCACA GGTGGTTCAG GCAGCACGAC TGGCACGGCA GGCCGGCGCC ATCGTCGTGG CTCTGACGGG ATTGGGACGC ACGCCGCTCA GCAAGGTCGT GCATCACACG CTGACCGTTT CAGCACCCGG AGACCGCTAT CGCCCTGAAG GCCTGGCGAC GCAGATCCCT CAGGTGGCGA TCCTAGACGC CCTGTTTACC AGCCTGCACG TCGCGCAGGA TCCCTATCTC TCTGAGCGGC TCTCGCGCGC AGCCGCAGCC CGGCGCGCCC TCAACGCTGA GCCTTCCCCC TAA
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Protein sequence | MATPPAHLPP VLRRLHLLRE EQGAATVRVI DQILMDPERF LSLTIAELSE AAGTSDATVV RLVQHLGFGG YQEFKLQLSR ALAVSRKADL TVEPQDASVT ILRKIFDSSN TALDDTLEHL NLEAFSAAVQ AMTLARHIEL IGMGASGVVA LSGQYRGLRL GLSCRASTDP GTFLSTCSLL EPTDVLIAVS FSGTRPQVVQ AARLARQAGA IVVALTGLGR TPLSKVVHHT LTVSAPGDRY RPEGLATQIP QVAILDALFT SLHVAQDPYL SERLSRAAAA RRALNAEPSP
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