| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dgeo_2292 |
|---|
| Symbol | |
|---|
| ID | 4059241 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Deinococcus geothermalis DSM 11300 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008025 |
|---|
| Strand | - |
|---|
| Start bp | 2413015 |
|---|
| End bp | 2413665 |
|---|
| Gene Length | 651 bp |
|---|
| Protein Length | 216 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641231342 |
|---|
| Product | peptide deformylase |
|---|
| Protein accession | YP_605755 |
|---|
| Protein GI | 94986391 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0242] N-formylmethionyl-tRNA deformylase |
|---|
| TIGRFAM ID | [TIGR00079] peptide deformylase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGAGG CCCCCCGCGT TTACCCCATC CGCCTGTACG GCGACCCGGT GCTGCGCCGC
AAGGCGAGGC CCCTGCAAGC TACCGATACC CTGACCGTGC CCGGCTTTGG CCCACAGTCG
GTGCGTGAGG TTGCCAACAC GATGCTCGAA ACGATGTTCG AGGCGCGCGG CGTTGGCCTG
GCCGCACCCC AGGTGGGTCT GCCTGTCCGC ATGTTTGTCG CCGTGGAGTA CGAGGATGAC
GAGGAGGAAC AGGAAGGCCG GGACGTGCCC CTCAAGTCCC GCGTGCTGCG CGAGTTCGTG
ATGCTGAATC CGGTCCTGAC GGTCATCGAC AAGAAAAAAG ACCGCTCGTA CCAGGAAGGC
TGCCTCAGCA TCCCCGGCAT CTACGAGGAA GGTGTGGCCC GTGCCCGCGC GGTGCAGGTC
CGGTACACCG ACCTCGACGG CCAGGAACGC ACGCTGGAGG CGGACGACTA CCTGGCCCGC
GTCTTCCAGC ACGAGACGGA TCACCTCGAC GGCGTGTTTT TCCTCGATCG CCTGCCCCCC
GAGGTGACCG AGGACCACCG CAAGGAGCTG GCCGCCATGC AGCGCCAGGC GAAGGCGTAC
CTCCAAGGGT TGGCCGAGGC CGAGAAGCGG CGGCGGGAGC AGGAAGGTTG A
|
|---|
| Protein sequence | MAEAPRVYPI RLYGDPVLRR KARPLQATDT LTVPGFGPQS VREVANTMLE TMFEARGVGL
AAPQVGLPVR MFVAVEYEDD EEEQEGRDVP LKSRVLREFV MLNPVLTVID KKKDRSYQEG
CLSIPGIYEE GVARARAVQV RYTDLDGQER TLEADDYLAR VFQHETDHLD GVFFLDRLPP
EVTEDHRKEL AAMQRQAKAY LQGLAEAEKR RREQEG
|
|---|
| |