| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dgeo_2236 |
|---|
| Symbol | |
|---|
| ID | 4056911 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Deinococcus geothermalis DSM 11300 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008025 |
|---|
| Strand | - |
|---|
| Start bp | 2356781 |
|---|
| End bp | 2357599 |
|---|
| Gene Length | 819 bp |
|---|
| Protein Length | 272 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 641231282 |
|---|
| Product | AraC family transcriptional regulator |
|---|
| Protein accession | YP_605699 |
|---|
| Protein GI | 94986335 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCACGCCG TCCGGCGGTC CCGAACGAAC ACCGAGTTGG TCCACGGGTT CTATCATCCC
TCGCTGTGCA TTGTAGCGAG GGGCGCCAAG AGCGTTTTAC TGGGCACGGA GATCTACAAG
TACGACGCTT CGCAGATGCT GGTCGTGTCG GTGGATCTTC CCGTGGCTTC TCAGGTCACC
CGAGCGAGCT TTGCCGAGCC GTTCTTGTGT CTTAAGCTGG ACCTTGATCC ACGCAGAATC
ACCGAGCTGG CTTTCAGGGT GTATCCGCAC GGCCTGCCGA AAGTCCGGGA GAACCGTGGG
GTCTGCGTCG GTCAGGCAGA TGCGAGCATT GTGAACGCCG CAACACGTCT CCTCGAATTG
ATGGCGGATG AGCGGGACGC GGAACTGCTT GCCCCGCTGG TCGTTGAGGA AATTCTGATT
CGCTTGTTGC GGGGTCCAAT GGGGAGCCGG GTCGCGCAGC TTGGGGAAGT GGAATCCAGC
ATGCACCGGA TTGCCCGAGC CGTTGATTGG GTGCGTGCCC ATTTCGACCA ACCCATGAAC
GTTCAGGCGC TGGCCGAGCT GGTCCACATG AGCCCAAGTG CGTTCCACGC ACACTTTCGA
GCAGTGACCT CACTGAGCCC GCTCCAGTAT CAGAAGGTGC TGCGCCTGCG GGAGGCAAGG
CGGCTGATGC TGACAGCCAA CTTGGACGTG GGGACGGCTG GACGGCAGGT GGGCTATGCC
AGTGCGTCGC AGTTCAGCCG GGAGTATCAC CGCCTGTTCG GGAGGGCACC GACCCAGGAC
ATCGCTCAGT TGCGTGAGCA TGCGAGCAGA ACGAGTTGA
|
|---|
| Protein sequence | MHAVRRSRTN TELVHGFYHP SLCIVARGAK SVLLGTEIYK YDASQMLVVS VDLPVASQVT
RASFAEPFLC LKLDLDPRRI TELAFRVYPH GLPKVRENRG VCVGQADASI VNAATRLLEL
MADERDAELL APLVVEEILI RLLRGPMGSR VAQLGEVESS MHRIARAVDW VRAHFDQPMN
VQALAELVHM SPSAFHAHFR AVTSLSPLQY QKVLRLREAR RLMLTANLDV GTAGRQVGYA
SASQFSREYH RLFGRAPTQD IAQLREHASR TS
|
|---|
| |