Gene Dgeo_1864 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDgeo_1864 
SymbolrplB 
ID4057594 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDeinococcus geothermalis DSM 11300 
KingdomBacteria 
Replicon accessionNC_008025 
Strand
Start bp1963077 
End bp1963910 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content65% 
IMG OID641230892 
Product50S ribosomal protein L2 
Protein accessionYP_605328 
Protein GI94985964 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0090] Ribosomal protein L2 
TIGRFAM ID[TIGR01171] ribosomal protein L2, bacterial/organellar 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0213539 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGTCA AGAAATACCG TCCCTATACT CCGTCGCGCC GTCAAATGAC GACGGCGGAC 
TTCAGCGGCC TGACCAAGAA GCGCCCAGAA AAGGCGCTCA CCGTCCCGCT GCCCAAGACC
GGTGGCCGCA ACAACCATGG CCGCATCACC AGCCGCTTCA TCGGCGGGGG TCACAAGCGT
CTCTACCGCA TCATTGACTT CAAGCGCCGT GACAAGGCGA ACGTGCCGGC CAAGGTTGCT
GCGATCGAGT ATGACCCCAA TCGCAGCGCT CGCATCGCCC TGCTGCATTA CGTCGACGGC
GAGAAGCGCT ACATCCTGGC ACCCGAGGGC CTGACTGTGG GCCAGACGGT GAACGCGGGG
CCGGAAGCCG AACCCAAGCT CGGCAACGCG CTGCCCCTGC GTTTTGTGCC GGTCGGTGCG
GTGGTGCATG CTGTGGAACT CGTGCCCGGC AAGGGCGCGC AGCTTGCTCG CAGCGCCGGT
ACCTCCATTC AGGTGCAGGG CAAGGAACGC GACTACGTAA TTCTCCGCCT CCCCAGTGGC
GAACTGCGCC GTATCCACAG CGAGTGCTAC GCCACCATTG GCACTGTCGG CAACGCCGAG
CACAAGAATA TCGTTCTCGG CAAGGCTGGT CGTAGTCGCT GGCTCGGCCG GAAGCCGCAC
CAGCGTGGCA GCGCCATGAA CCCGGTGGAT CACCCACACG GTGGTGGTGA AGGCCGCACC
GGTGCAGGCC GCGTGCCCGT CAGCCCCTGG GGTCAGCCTG CGAAGGGCCT CAAGACCCGT
AAGAAGCGCA AGATTTCCGA CCGGTTCATC ATCACCCGCC GCGGTGGGAA GTAA
 
Protein sequence
MAVKKYRPYT PSRRQMTTAD FSGLTKKRPE KALTVPLPKT GGRNNHGRIT SRFIGGGHKR 
LYRIIDFKRR DKANVPAKVA AIEYDPNRSA RIALLHYVDG EKRYILAPEG LTVGQTVNAG
PEAEPKLGNA LPLRFVPVGA VVHAVELVPG KGAQLARSAG TSIQVQGKER DYVILRLPSG
ELRRIHSECY ATIGTVGNAE HKNIVLGKAG RSRWLGRKPH QRGSAMNPVD HPHGGGEGRT
GAGRVPVSPW GQPAKGLKTR KKRKISDRFI ITRRGGK