Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dgeo_1852 |
Symbol | rplF |
ID | 4057582 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Deinococcus geothermalis DSM 11300 |
Kingdom | Bacteria |
Replicon accession | NC_008025 |
Strand | - |
Start bp | 1957929 |
End bp | 1958486 |
Gene Length | 558 bp |
Protein Length | 185 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641230880 |
Product | 50S ribosomal protein L6 |
Protein accession | YP_605316 |
Protein GI | 94985952 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0097] Ribosomal protein L6P/L9E |
TIGRFAM ID | [TIGR03654] ribosomal protein L6, bacterial type |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.668423 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCCGTA TTGGTAGACA GCCTATCGCC GTACCCAATG GTGTGACGGT GAACGCCCAG AACGGCGTGT TTACGGCGAA GGGGCCGAAA GGTGAACTGA GCGTTCCCTA CAACACGGCC CTCAACATCA CGCAAGAAAA CGGGCAGCTG CTTGTCACGC GCCCGAGCGA CCGCCAGGAG CACCGCGCCC TGCATGGCCT GACTCGCACG CTGGTGGCCA ACGCCGTCAA GGGCGTGAGC GACGGCTACA CCATCAATCT GGAACTGCGT GGTGTTGGTT ACCGTGCTCG CCTGGTGGGG AAGAACCTCG AACTGACCAT CGGTTACAGC CACCCGGTCG TCATTGAGCC GCCCGCTGGC GTAACCTTTG CTGTGCCCGA ACCCACCCGG ATCGACGTCA TGGGCATCGA CAAGCAGCTG GTCGGTCAGG TCGCCGCGAA TGTCCGCAAG GTCCGCAAGC CCGACGCCTA CCACGGCAAG GGTGTGCGCT TTGTCGGCGA ACAGATCGCC CTCAAGGCCG GTAAGGCTGG CGCTACGGGC GGGAAAGGGA AGAAGTAA
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Protein sequence | MSRIGRQPIA VPNGVTVNAQ NGVFTAKGPK GELSVPYNTA LNITQENGQL LVTRPSDRQE HRALHGLTRT LVANAVKGVS DGYTINLELR GVGYRARLVG KNLELTIGYS HPVVIEPPAG VTFAVPEPTR IDVMGIDKQL VGQVAANVRK VRKPDAYHGK GVRFVGEQIA LKAGKAGATG GKGKK
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