Gene Dgeo_0208 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDgeo_0208 
Symbol 
ID4059116 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDeinococcus geothermalis DSM 11300 
KingdomBacteria 
Replicon accessionNC_008025 
Strand
Start bp193407 
End bp194600 
Gene Length1194 bp 
Protein Length397 aa 
Translation table11 
GC content66% 
IMG OID641229208 
Productpeptidase M20D, amidohydrolase 
Protein accessionYP_603680 
Protein GI94984316 
COG category[R] General function prediction only 
COG ID[COG1473] Metal-dependent amidase/aminoacylase/carboxypeptidase 
TIGRFAM ID[TIGR01891] amidohydrolase 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCAAA CGGTGGACCC GGTGGCGACC CTCCGTGACC AGCTCATCGC GTGGCGGCGG 
CACCTGCACA TGCATCCAGA AGTGGGCTTT GAGGAACACG AGACGGCAGC CTACATCGAG
GCCGAGCTGC GGAAGATGCC GGGCCTGACC GTCACCCGCC CCACCGCGAC CAGCGTCCTG
GCCGTTCTCA AAGGCGGCCG GCCCGGGCGC ACCATTCTGC TGCGGGCCGA CATCGATGCC
CTCCCCATCG AGGAGGAGAA CACCTTCGAG TTCCGCTCGC GCAGACCCGG GGTCATGCAC
GCCTGCGGCC ACGACGGCCA TACGGCAATC CTGCTGGGAG TGGCCAAACT GCTCTCCGAA
CACCCCGAAC ACGTGCCGGG GGAGGTCCGG ATGATCTTCC AGCATGCCGA GGAGATCGGG
CCGGGCGGCG CCGAGGAACT GGTGATGAAT ACGGGGTTGA TGGACGGCGT GGACGTGGTG
ACCGGCCTGC ACCTCAACAG CCAACTTCCA ACCGGAATGG TGAGTGTCAA GCCGGGGGCC
TTTATGGCCG CGCCCGACAG CCTATACCTC ACCATCCAGG GCAAGGGCGG GCACGGCGCC
CACCCCGAAC AGACGGTGGA CCCCATTGCG GTCGGCGCGC AGGTCGTGAC CAACCTCCAG
CATGTGGTCA GCCGCCACGT GGCGGCGCTC GACGCTCTGG TCGTCAGCAT CACGTCCTTC
CAGAGCGGCA CCACCCACAA CGTGATTCCC GATACGGCGG TCCTCCAGGG CACCGTGCGG
ACCTTTGACC CAGAGCTGCG CCAGCGCGCC CCAAAGCTGA TCGAACGCGT GATCAAGGGG
GTGTGTGAGG CACATGGGGC GAGCTACACG CTGAAGTACG AGTTCGGTTA CCGGCCCGTC
ATCAACACCG ACTGGGTGGC CGCACAGCTG AGAGAAATCG CGCTGGAGAC CGTAGGGGAA
GAGCACTACC AGGACGCGCA GCCCACGATG GGTGGCGAGG ATTTCAGCGC CTATCTGGAA
AAGGCCCCCG GCGCGTATTT CAACGTGGGG TCCGGCAGTG ACGAGCAGGA CAGCCGCTGG
CCGCACCACC ACCCCCGCTT CACCCTCGAC GAGGCCAGCC TGGAAACCGG GGTCCGGATG
CTGCATGCGG CTGCGCTGCG CCTCACGCTG CCGCAGCCGC ACCCGCAAGG ATAA
 
Protein sequence
MTQTVDPVAT LRDQLIAWRR HLHMHPEVGF EEHETAAYIE AELRKMPGLT VTRPTATSVL 
AVLKGGRPGR TILLRADIDA LPIEEENTFE FRSRRPGVMH ACGHDGHTAI LLGVAKLLSE
HPEHVPGEVR MIFQHAEEIG PGGAEELVMN TGLMDGVDVV TGLHLNSQLP TGMVSVKPGA
FMAAPDSLYL TIQGKGGHGA HPEQTVDPIA VGAQVVTNLQ HVVSRHVAAL DALVVSITSF
QSGTTHNVIP DTAVLQGTVR TFDPELRQRA PKLIERVIKG VCEAHGASYT LKYEFGYRPV
INTDWVAAQL REIALETVGE EHYQDAQPTM GGEDFSAYLE KAPGAYFNVG SGSDEQDSRW
PHHHPRFTLD EASLETGVRM LHAAALRLTL PQPHPQG