Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dgeo_0046 |
Symbol | |
ID | 4058487 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Deinococcus geothermalis DSM 11300 |
Kingdom | Bacteria |
Replicon accession | NC_008025 |
Strand | + |
Start bp | 41414 |
End bp | 42151 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641229042 |
Product | polysaccharide deacetylase |
Protein accession | YP_603518 |
Protein GI | 94984154 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.671199 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGACGCC TCGGCCTTCT GCTGGCCTTT TTGCTGAGCT CCGCCCACGG CTTGAAGCCC TCGCTGGATG CCCGCGGTGT CGTGACCCAC GGGCCGCGCA CCCTCCGCGC GGTGGCCCTC ACCTTTGACG CCGACATGAC GCCCGGCATG GAGGCCGAAC TGCGCCGCGG CCAGGTCCGC AGCTTCTATG ACGCCGGGGT GGTGCAGGCT CTGGAAAACA CCCATACTCC CGCCACCTTC TTCCTGACCG GGATGTGGGC GCAGGTTTAT GCCCAGCAGG CGCGGGCACT TGCCCAATCG CCCGAATTCG AGATCGAGAA CCACAGCTAC GACCACCCCG GCTTCTCGCA GCCCTGCTAC GGTCTCAAGC CTGTTTCCCA GACACGGAAA GCCGCCGAGA TCGAGCGTGC GCAGCATGCC ATCGAGGCTG TGACCGGTGT GACGCCCAGG TACTTCTGCT TTCCGGGCGG GTGCGCTGCC GAGGCGGATG TCCAGCTGGC CGAGGCGCAG GGCCTCCAGG TGGTCCATTG GGACGTGGTG GGCGGCGATG TGAACCAGCC GGACCCCGAG CGCATCACCC GGCAGGTGCT GGAGCGTGTG CGCCCGGGCA GCATCGTGGT GCTGCACGTG AGTGGTGGCC ACGCACCTGC CACCGGCCAG GCCCTCCCCG CCATCATTGC CAGCTTAAAG GCCCGAGGGT ACACCCTCGT GACGGTGCAG CACCTGCTGG GGCATTGA
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Protein sequence | MRRLGLLLAF LLSSAHGLKP SLDARGVVTH GPRTLRAVAL TFDADMTPGM EAELRRGQVR SFYDAGVVQA LENTHTPATF FLTGMWAQVY AQQARALAQS PEFEIENHSY DHPGFSQPCY GLKPVSQTRK AAEIERAQHA IEAVTGVTPR YFCFPGGCAA EADVQLAEAQ GLQVVHWDVV GGDVNQPDPE RITRQVLERV RPGSIVVLHV SGGHAPATGQ ALPAIIASLK ARGYTLVTVQ HLLGH
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