| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_5774 |
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| Symbol | |
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| ID | 8229390 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 6934649 |
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| End bp | 6936721 |
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| Gene Length | 2073 bp |
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| Protein Length | 690 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644933619 |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003090127 |
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| Protein GI | 255039506 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.872771 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCAAAA TCTCTATTAC CGGCCTTATG GCTGCATTCA TCATCCTCAA CGACACCGGC
CCGGCGATGG CCCAAAGCGA CTCGCTCCAA GCCCGCGAGC TACGCGAAAT CACCGTACAC
GCATTTGAAT CGGATAAAGA CCCGCTTTCC ACCACTGCCA CGGTAGGCAT GCTGAGCCCG
CGTTCGCTTA GCCGGTTTTC CAACTACACC TGGGCTAACG CGGTAAATAC CATCCCGGGC
GTGCGCATGG ATGAGCGCTC GCCGGGCAGT TACCGGTTTT CGGTGCGGGG AAGCCTGATC
CGCTCGCCGT TTGGGGTGCG CAATGTAAAG TTTTACTGGA ACGGCATTCC ATTCACCGAC
GCGAGCGGCA ATACACCGTT GAATTCCGTC GATTATGGCG CTATCCAGAG CATGGAGATC
ATTAAAGGCC CCGGAAGCAG CATTTACGGA GCGGGCACGG GCGGAGTGGT GCTTATGCAA
AGCCGGCCGG ACAATGAGTT TCAAAACCGA GCTGAACAGA GTGTGAGCTT TGGTAAATAT
GGCTTTCACA GCCGCAACTC TACCTTGCAG GTCGGCGGAA TGTCGATCCA GTATGGCCAT
AGCGAGCAGG ATGGCTACCG AAACCACAGC AACATGGTCC GCGACGCGAT CCGGTTTACT
TCTACTTCCA ATATCGGAGA AAAAGGCACG CTCTCGCTGC TGGGAATGTA CTCCGATTTG
TACTACCAAA CTCCGGGAGG CATTAACCTC GCACAATACC AGTCCAATCC CCGCCTAGCC
CGCCAATCCA CCCCGACCAT ACCGGGCAGC GAAGCGCAAA AGGCCGCCAT TTACACCAGA
ATGGCATTAC TCGGCGGAAA TTACGTGCTG CCATTATCCG ACAGCTGGAC ACAATCTACC
GCATTGTACC TCACATTCAC GGACTTTGCC AACCCATTCA TTTCCAACTT CGAAAAGCGT
GACGAGAACG GCATCGGCGG AAGGAATATC TGGCAGCATA AATCGGAATG GGGCAATGTA
AAAACGAACT GGACAAGCGG CTTCGAATGG CAGTACGGCA AGTCGGCGCA GCGCAACTAT
GACAACATAG GCGGTGTGGC CGACAAGCAG CAAACCACGG AGGATATCCG CACAAGCAAC
CTTTCCGTGT TCAGCCAGCT GGAAGCCGTC CTGCTCACCG ACCTGACATT GAGCGCCGGT
TTAAGCTACA ACACTTCCAA GTACAAATAC GAACGCTACT TCCCGCTGCC TTATAATGAA
GATCAGAAGA CGTTCGACGG CATATTCATC CCGCGCTTCG CGGCCAACAA AATCATTGCG
GGCAATTGGT CGGTTACGGC CTCGTACAGC GGCGGTTTCT CCCCTCCTAC CTTGCAGGAG
GTGCGCCCGT CGGCCGGGGG ATTCCGCAAG GACCTGGAAG CCGAGAAGGG CAACAATACC
GAGATCGGCA TTCGTAAAGC TGGAAAAGTG ATTTCGGGGG AAATCAGCTT GTACCATTTC
GGGCTTCGGG ACGCGATCGT GCGCCGGCTG GACGAGTCGG GTGCCGAATA TTTTGTGAAT
GCGGGTAAAA CGAAACAGCG CGCTGTGGAA TGGACCATCG GCTGGGACAT CCTCTCGAAC
CCGCAGTTGT CGGTGATGCT GAAACTCTGG AATTCGGGCA CATACACGAA ATACACTTAC
GAGGAATTCC AGCAGGCGGA CGCCGACCTG AGCGGGAAAC TCATTCCCGG CATTCCGCGT
TTTTCCCAAT CCACCGGGCT CGATGTGCTG CTTAAATATG GCGTTTCGGC ATTTCTTACC
TACCAGCACG GCGATTCGTT CTATCTCAAC GATGCGAATA CGGTTAAAAA CACTGCCTAC
AACCAATGGG CGGCTCGCGT GAGCTGGAAG AAAAGCTGGG GACAACATTT TTACAGCGAG
CTGTCGGCGT CTGCGGAGAA AGTCAATGCG GGCATTTACA GCCTCGGCTA CGACCTTAAC
GCATTCGGTA ACCGCTATTT CAACAGCGCT CCGAAAAACA ACCTCTGGGC CGGCGTGAAG
ATCGGCTGGG AGTGGCAGAA AAATTCAAGA TAA
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| Protein sequence | MLKISITGLM AAFIILNDTG PAMAQSDSLQ ARELREITVH AFESDKDPLS TTATVGMLSP
RSLSRFSNYT WANAVNTIPG VRMDERSPGS YRFSVRGSLI RSPFGVRNVK FYWNGIPFTD
ASGNTPLNSV DYGAIQSMEI IKGPGSSIYG AGTGGVVLMQ SRPDNEFQNR AEQSVSFGKY
GFHSRNSTLQ VGGMSIQYGH SEQDGYRNHS NMVRDAIRFT STSNIGEKGT LSLLGMYSDL
YYQTPGGINL AQYQSNPRLA RQSTPTIPGS EAQKAAIYTR MALLGGNYVL PLSDSWTQST
ALYLTFTDFA NPFISNFEKR DENGIGGRNI WQHKSEWGNV KTNWTSGFEW QYGKSAQRNY
DNIGGVADKQ QTTEDIRTSN LSVFSQLEAV LLTDLTLSAG LSYNTSKYKY ERYFPLPYNE
DQKTFDGIFI PRFAANKIIA GNWSVTASYS GGFSPPTLQE VRPSAGGFRK DLEAEKGNNT
EIGIRKAGKV ISGEISLYHF GLRDAIVRRL DESGAEYFVN AGKTKQRAVE WTIGWDILSN
PQLSVMLKLW NSGTYTKYTY EEFQQADADL SGKLIPGIPR FSQSTGLDVL LKYGVSAFLT
YQHGDSFYLN DANTVKNTAY NQWAARVSWK KSWGQHFYSE LSASAEKVNA GIYSLGYDLN
AFGNRYFNSA PKNNLWAGVK IGWEWQKNSR
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