Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_5675 |
Symbol | |
ID | 8229291 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | + |
Start bp | 6820611 |
End bp | 6822437 |
Gene Length | 1827 bp |
Protein Length | 608 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 644933522 |
Product | RagB/SusD domain protein |
Protein accession | YP_003090030 |
Protein GI | 255039409 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.324394 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTAACC AAGCATCAAA ATATATACTG GCATTGGGCC TCCTGAGCAG CGTAGTAGCC ATTACTTCCT GCAAGGAGAC CTGGCTGAAA CCCGAGCCCC TTTCGTTTTA CGAGCCAGAC CTGACATTTA AGGACGTTGC CGGGCTAAGG GCAACGCTCG TTGCCTGCGA ACGGAACCTC CGCCTCGAAT GGTACGGCGA CGCGATGCCG ATGATCACGG AATCGGTATT TTCGGATATT GCCGTGGAGG GGACCACCGA CAAATCGGGA CCGGCACAGA ACCTGAACCT GCTCATCACC CCCGATGCCC AGCTGAACCA CATTGATTAC AACCGCATCG GGTGGTATTG GCTGGAAGGG TATAAGGGGA TCAAATACGC TAATACGGCC ATTTCGCGCA TTGATTTACC TGCTTATAAG AACGAGCAGG AGAAAAACGA GCTGCTCGGC GCCGCTTATT TTCACCGCGC GGCACGGTAC TACCGGCTCA CGCAGCAGTT CGGAGACGTG CCGCTGATCC TCAGTGAAAT CAACGGCCCG AAACTCGATT TCCAGACCAC GAAACGCGAG GTGATCCTTA AAAAGATGAA GGAAGACCTC GAATTCGCTG AAAAATGGGT GCCCGTCGTG ACGGACAAAG GAACAGTGAA CCGGGGCTCG GTAAGCCATT TGCTCACGAA AGTAAACCTC GCACTGGGGC TGTTCGACGA TGCGATCAAA TCTGCAAGTA ATGTGATCGA TGGCGGAACG CACAAGCTCA TGACATCACG GTTTGGAGTG AATGCCAACG ACGCGACCCG CAACGTGGTC TGGGACTTGC ACCGGCCTCA GAACAAATCG CTGGCGGTAA ACACGGAAGG GCTGATGCTG GTCATCGACC GGTTGAATAT CGAGGGTAAT GTGGATGGCG GCATGCTGAT CATGCGGAAC TGCGTGCCGC TTTGGTTCAA CAACATTAAC ACGCCGAACG GGAACCGCGG GACAATTGAC ACCTACGGCA TCGAGATCGA CCAGGTGGTC AAGCTGGGGC GGGGGATCGG GCGCTTGCGG CCCACCGATT ATTCGCAGAA CCAGATTTGG GACGACAAGA ACGACCTCCG CCACGCGCCG GGCAACTGGA CACGCATGGA GGATATTTTA TACAATAACC CGCAAATCAA AGAAACGGAC AGTTTCTACG GCAAGCATTT GCAGCTCAAA AACGCGGAGG GGGTAGTGCT CTCCGTGGAT ACGATCCGCT GCTGGTTCGA CTGGCCGAAT TATAAGCTAT TCGTAGAAGA CCCGCAGCGG GTACAGCCCC AGGGCGGCAA CTCCGACTGG TACGTGTTCC GCCTGGCCGA AACTTATCTG CTCCGCGCAG AGGCGTACGT GTGGAAGGGA GAGCTCGCCA AAGCAGCAGA CGACCTCAAT GCCGTCCGTG CCCGGGCCAA CTGTGCGCCG ATTGCCGCCG GTAAGATCAA CATTGGCACC ATTCTCGACG AGCGCGCACG GGAGCTCTAT TTTGAAGAAC CGCGCAAGAC CGAGCTTACA CGAATTGCCT ACATTTTCGC CCAGACCGGA AAACCCGCTC CAAATGGCAA AACTTACAGC CTGGCGCAAT TCTCGGACGA AAACTATTTC TATGACCGCG TGATGGAGAA AAGCGATTTC TATAACAAAG GAGTCCAAAC ACGGCATGCC GACGAATATA CCATGAGCCC TTACCACGTG CTCTGGCCAA TTCCGCAATC GGCCATCGAT GGCAACACGC AGGGGCGGAT CAATCAAAAC AAAGGATATG CAGGACATGA GAAGAATGTG CCTCCGCTCA CGGAGATCCC CAAATAA
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Protein sequence | MFNQASKYIL ALGLLSSVVA ITSCKETWLK PEPLSFYEPD LTFKDVAGLR ATLVACERNL RLEWYGDAMP MITESVFSDI AVEGTTDKSG PAQNLNLLIT PDAQLNHIDY NRIGWYWLEG YKGIKYANTA ISRIDLPAYK NEQEKNELLG AAYFHRAARY YRLTQQFGDV PLILSEINGP KLDFQTTKRE VILKKMKEDL EFAEKWVPVV TDKGTVNRGS VSHLLTKVNL ALGLFDDAIK SASNVIDGGT HKLMTSRFGV NANDATRNVV WDLHRPQNKS LAVNTEGLML VIDRLNIEGN VDGGMLIMRN CVPLWFNNIN TPNGNRGTID TYGIEIDQVV KLGRGIGRLR PTDYSQNQIW DDKNDLRHAP GNWTRMEDIL YNNPQIKETD SFYGKHLQLK NAEGVVLSVD TIRCWFDWPN YKLFVEDPQR VQPQGGNSDW YVFRLAETYL LRAEAYVWKG ELAKAADDLN AVRARANCAP IAAGKINIGT ILDERARELY FEEPRKTELT RIAYIFAQTG KPAPNGKTYS LAQFSDENYF YDRVMEKSDF YNKGVQTRHA DEYTMSPYHV LWPIPQSAID GNTQGRINQN KGYAGHEKNV PPLTEIPK
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