| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_5667 |
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| Symbol | alaS |
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| ID | 8229283 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 6804584 |
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| End bp | 6807244 |
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| Gene Length | 2661 bp |
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| Protein Length | 886 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 644933514 |
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| Product | alanyl-tRNA synthetase |
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| Protein accession | YP_003090022 |
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| Protein GI | 255039401 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0013] Alanyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00344] alanine--tRNA ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCTCGC ATCAAATACG TCAGGCTTTT CTTGATTTTT TCCGCAGTAA AGAGCATTTA
ATTGTACCCT CGGCGCCGCT GGTAGCCAAG AACGACCCCA CTCTGATGTT CAACAACTCC
GGAATGGCGC AGTTCAAGGA CTTTTTCCTC GGCAACGGCA CCCCGCCGTC GCGCAGGATC
GCGGATACAC AGAAATGCCT GCGCGTTTCG GGAAAGCATA ATGACCTCGA AGATGTTGGT
TTTGACACCT ATCACCACAC CATGTTCGAA ATGCTCGGCA ACTGGTCGTT TGGTGATTAT
TTCAAAAAAG AAGCGATTGC CTGGGCGTGG GAACTGCTGA CGGACGTTTA CAAACTTCCG
AAAGACCGGC TGTACGTGTC TGTATTCGAA GGGAATGAGG CCGACGGCGT GCCGTTCGAC
CAGGAAGCGT GGGATCTTTG GAAAGGCATT GTAGGCGAAG AACGCATTAT CCTGGGCAAT
AAGAAGGACA ATTTCTGGGA AATGGGCGAT ACCGGTCCGT GCGGCCCCTG CTCCGAAATC
CATATAGATT TGCGCTCGCC GGCCGAGGTG GCGGAAGTTT CGGGCAAATC GCTCGTGAAC
AACGACCATC CGCAGGTGGT GGAGATATGG AACCTGGTAT TCATGCAGTT TGAGCGCAAG
GCCGACGGCT CGCTGATCCC CCTCCCGTCG ACGCACGTTG ATACCGGAAT GGGCTTTGAG
CGCCTTTGCA TGGCCATCCA GCAAAAAACA TCGAACTATG ACACCGACGT TTTCCAAAAC
ACTATTAATG TACTTGAAAC GCTTTCGGGC AAGAAATACG GGCAGAATGA CGAGCCGTTT
GCCGACATCG CGATGCGCGT CATCTCCGAT CACATTCGGG CCGTGTCGTT CGCGATCACG
GATGGTCAGT TGCCTTCCAA TGTGAAAGCG GGCTATGTGA TCCGCCGCAT TCTCCGCCGC
GCGGTGCGGT ATGGCTACTC CTACCTGGGC TTTCAGGAGC CATTCTTCCA CAAGCTGGTG
CCGGTACTGG CTGAGCAGTT CAAGGATGTG TTTACGGAGC TGAAAGACCA GGAAGAATTT
GTAACGCGCG TGATCCTGGA AGAGGAAAAA AGCTTCTTGC GCACGCTGGA ATCGGGTTTA
AAAAGGCTGG ACAGCATTAT CGGCGGACTG AAAGAAACTG GCCTCAACAC GATCCCCGGC
GACGAGGTTT TCGAACTGAG CGATACCTTC GGCTTCCCGG TGGACCTTAC CGCGTTGATC
GCCCGTGAAA AGAATTTCCG GATTGACGAA GCCGGTTACC AGGATGCATT GGCAGAGCAG
AAAAAACGCT CCCGCCAGGA TGCCGCCAAA GAAGCTACCG ACTGGATCGA GCTACGCGAA
TCCGATGGCG TGGAATTCCT GGGCTATGAT TTTGAAGAAA CCCACAGCCA TATTGTGAAA
TACCGCAAGG TGAAAACCAA GGCTGGCGAG GAGTACCATA TCGTGCTCGA CCGCACGCCT
TTTTATGCTG AAATGGGCGG ACAGGTTGGA GATACCGGAG CATTGCTATT GAATTCAGGG
AGTAAGGAGG ATGGAGCAAG GAGCATTAGT ATTGTAGATA CAAAAAAGGA GAACGACCTT
TTTGTACATA TTTCGCGAGA CAAGAACCTC GATGAGGCAT TGTCCGGCGC GGGCATTGTG
ACTGCTCAAA TCAATGTGGA GCGCCGCAAC AAAATCAAAT CGAACCACAC GGCTACGCAC
CTCATGCTCT CGTCTATGCG CGAGGTGCTG GGTACGCATG TGAGCCAGAA AGGTTCCTAT
TTAAATGATG AAGTACTCCG TTTCGACTTT GCGCATTTCT CTAAGGTGAC CGACGAGGAA
CTCAGAAAGA TCGAAGACCG CGTGAATGAG AAGATCCGCG AGAATATTGC ATTGGAAGAA
AGAAGGAACG TGCCCATTCA GCAGGCGCTG GATGCGGGCG CTACCGCGAC TTTCGGTGAA
AAATACGGCG ATTTTGTGCG CCTGATCATC TTCGATCCGA AGTTCTCTTT CGAGCTTTGC
GGGGGGACAC ACGTGCCTTC TACCGGGGAG ATCGGTGTGT TTAAATTCAT TTCCGAAGGT
TCGGTGTCAG CTGGTGTTCG CCGCGTGGAG GCTGTGACCG GAGAAAAAGC ATTGGAACTG
ATGCGCCAGC AGGAGGAAAC TCTGAACAAA ATCAAAGACC TGCTCAAAGG CCCGACCGAT
CTTATCAAAG CCGTCGAAAA CCTGATCGAA GAGCGTTCGG CATTGCAGAA AAAGATCTCC
GCGTTGGAAA ACGAGAAGAT CCAGGCATTG AAAACCACGC TGGTTGAGAA TATGGAAACC
CATAGCACCT TCAACCTGAT CGTGCAGAAA GTGGACGTCC CGTCGGCAGA TTCGCTGAAA
CAGCTCTCCT ACGAGCTGCG CGACCAGGTG GAGAACCTGA TCGCCGTTTT CGGCGCTGAA
ATCGGCGGCA AACCGCAACT TTCGGTATTC ATTGCCGAGA ATATCGTTGC CGAAACCGGC
CTTAATGCAG GAAAGATCGT GAAAGACCTC GCGAGGGAAA TCCGCGGCGG CGGTGGCGGG
CAGCCTTTCT TCGCCACAGC CGGCGGCTCG GATGCCAGCG GACTGGATGT GGCGCTCGAA
AAAGCGAAAG GCTTGTTCTA A
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| Protein sequence | MTSHQIRQAF LDFFRSKEHL IVPSAPLVAK NDPTLMFNNS GMAQFKDFFL GNGTPPSRRI
ADTQKCLRVS GKHNDLEDVG FDTYHHTMFE MLGNWSFGDY FKKEAIAWAW ELLTDVYKLP
KDRLYVSVFE GNEADGVPFD QEAWDLWKGI VGEERIILGN KKDNFWEMGD TGPCGPCSEI
HIDLRSPAEV AEVSGKSLVN NDHPQVVEIW NLVFMQFERK ADGSLIPLPS THVDTGMGFE
RLCMAIQQKT SNYDTDVFQN TINVLETLSG KKYGQNDEPF ADIAMRVISD HIRAVSFAIT
DGQLPSNVKA GYVIRRILRR AVRYGYSYLG FQEPFFHKLV PVLAEQFKDV FTELKDQEEF
VTRVILEEEK SFLRTLESGL KRLDSIIGGL KETGLNTIPG DEVFELSDTF GFPVDLTALI
AREKNFRIDE AGYQDALAEQ KKRSRQDAAK EATDWIELRE SDGVEFLGYD FEETHSHIVK
YRKVKTKAGE EYHIVLDRTP FYAEMGGQVG DTGALLLNSG SKEDGARSIS IVDTKKENDL
FVHISRDKNL DEALSGAGIV TAQINVERRN KIKSNHTATH LMLSSMREVL GTHVSQKGSY
LNDEVLRFDF AHFSKVTDEE LRKIEDRVNE KIRENIALEE RRNVPIQQAL DAGATATFGE
KYGDFVRLII FDPKFSFELC GGTHVPSTGE IGVFKFISEG SVSAGVRRVE AVTGEKALEL
MRQQEETLNK IKDLLKGPTD LIKAVENLIE ERSALQKKIS ALENEKIQAL KTTLVENMET
HSTFNLIVQK VDVPSADSLK QLSYELRDQV ENLIAVFGAE IGGKPQLSVF IAENIVAETG
LNAGKIVKDL AREIRGGGGG QPFFATAGGS DASGLDVALE KAKGLF
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