Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_5624 |
Symbol | |
ID | 8229240 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | - |
Start bp | 6760925 |
End bp | 6761467 |
Gene Length | 543 bp |
Protein Length | 180 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 644933471 |
Product | ATP-dependent protease peptidase subunit |
Protein accession | YP_003089979 |
Protein GI | 255039358 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG5405] ATP-dependent protease HslVU (ClpYQ), peptidase subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 42 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGAAGA TACACGCTAC TACCGTCCTG GGAGTACTTC ACAACGGAAC TGTCGCATTG GGCGCGGACG GTCAGGCTAC AATGGGCAAT ACAGTTGCCA AGAGTAATGT TAAAAAGATC CGCACGTTGC AAGGCGGCAA AATCCTCGTA GGATTCGCAG GCTCCACGGC CGACGCATTC ACTTTACTGG ATCGTTTTGA AGAAAAACTG AATGGATACG GCGGCAATAT GAAACGCGCC GCCATCGAAC TCGCCAAAGA CTGGCGCACC GACCGCTACC TGCGTAAGCT GGAAGCGATG ATGATCACGG CCAACAAGGA TGAAATCCTC GTCATTTCGG GCACTGGTGA TGTATTGGAA CCTGAAAATG GCATTGCCTC CATCGGCTCG GGCGGAAATT TTGCATTATC GGCAGCGCAG GCATTGAAAA AGCATGCTAC GCATCTTTCG GCAGAGGAGA TGGTGCGGGA AGGGCTGACC ATTGCGGCAG ATCTTTGCAT TTATACCAAT CATAACCTGG TGATCGAGAA AGTCGTTCAG TAG
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Protein sequence | MEKIHATTVL GVLHNGTVAL GADGQATMGN TVAKSNVKKI RTLQGGKILV GFAGSTADAF TLLDRFEEKL NGYGGNMKRA AIELAKDWRT DRYLRKLEAM MITANKDEIL VISGTGDVLE PENGIASIGS GGNFALSAAQ ALKKHATHLS AEEMVREGLT IAADLCIYTN HNLVIEKVVQ
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